Vibrio ruber: RND59_00420
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Entry
RND59_00420 CDS
T09542
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vru
Vibrio ruber
Pathway
vru00130
Ubiquinone and other terpenoid-quinone biosynthesis
vru01100
Metabolic pathways
vru01110
Biosynthesis of secondary metabolites
vru01240
Biosynthesis of cofactors
Module
vru_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
RND59_00420 (menD)
Enzymes [BR:
vru01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
RND59_00420 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
WNJ95620
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Position
1:complement(90856..92616)
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AA seq
586 aa
AA seq
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MKSQQAVLNRIWSRLILEELSRLGVRDVCVAPGSRSTPLTLEADAHPALQLHRHFDERGL
GYLALGLAKASHQPVAVIVTSGTAVANLLPCVVEANLTGEKLVLLTADRPVELIDCGANQ
AIEQPGIFAAHVVQAINLPSPTTAIAPNWLLTTLDQALAVQERRGGAVHINCPFPEPLYI
QHDEVVDDAAYLSRVQHWLTQGLPYSRKCGGQYAPVRPEPTLLRQRGVVIIGSLPLADAE
KAKAFAQRLGWPVFCDPQSGVSSDWAYFDLWLHHPLSRQILSACELIIQFGGQVVSKRLN
QWLQQQVTQHGSHYVLVAADEKCNNPSHLPQQQIAAPVANWVDVQLESVQADNLSAGCSL
TDCSSTDRSSANWADQLLTMIQGIPAVIEQVAATTTALSELDVARSVATLAPTADLFIGN
SLIVRLVDMFGTINHQNVYSNRGASGIDGLVATAVGVQRERQHPMLLLLGDTSLLYDLNS
LALLSNTPQPFVIVVTNNDGGAIFDLLPVPKQQKTDLYQMPHGYDFRHAAAQFGLQYAKP
ESVSALTDCVTQHIERGQHGLVVEVSVPAGEAAQHIQQVIQHVCTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctcaacaagcggtcttgaaccggatctggagtcgcttgattctggaggaattg
tcgcgtctgggcgtgcgtgatgtgtgtgttgctccgggctcgcgttctacaccattgaca
ctcgaggccgatgcgcatccggcgttgcagctccatcgccattttgatgaaagagggctg
ggttatctggcgctgggtctggcaaaagccagtcatcaaccggtcgctgtgattgtgaca
tcggggactgcggtggcgaatttactcccgtgtgtggttgaagctaatttgacgggcgaa
aaactggttttgttaaccgcagaccgcccggtagagttgattgactgcggcgcgaatcag
gcgattgagcaaccgggtatttttgccgcgcatgtggttcaggcgatcaacttacccagc
ccgaccaccgcgattgcgcccaactggttgctcacgacacttgatcaggcacttgcggtg
caggagcgtcgtggtggcgcagtccatatcaattgtccgtttcctgaaccgctgtatatc
cagcatgatgaagtcgtcgatgatgcggcttatctgagccgtgtgcagcactggctgaca
caaggtttgccgtacagccgcaaatgtggcggtcaatacgcacctgtccggccggagccg
acactgttgcgccagcgcggggttgtgattatcggctctctgccgttggctgatgcagaa
aaagccaaagcatttgcacagcggttaggctggcctgtgttctgcgacccccaatcgggc
gtatcaagtgactgggcatatttcgatctctggcttcatcatccactatcgcggcagatt
ttatcagcatgtgagctgatcattcagtttgggggacaagtggtttccaaacggctcaat
cagtggctgcaacagcaagtcacccagcatgggagtcattatgtgctggtcgctgcggat
gagaaatgcaataacccgtctcatctgccccaacagcagatcgcggctccggttgcaaat
tgggttgatgtgcaacttgaatcggttcaggcagacaatttatcagccggttgctcatta
acggattgctcgtcaacggatcgctcatcagcgaattgggcggatcaattgctgacgatg
attcagggtatcccggcagtgatagagcaagtagcagcaacaacgacggccctttctgag
ctggatgttgcgcgctcagtggcgacactggctcccactgcggatttatttatcggcaat
agtttgattgttcgtttagtggatatgttcgggactatcaatcatcagaacgtgtactcc
aaccgtggtgcgtcgggtattgatggtctggtggcaacggctgtcggagttcagcgcgaa
cggcagcatccgatgttattactgctgggcgatacttctctgttgtatgacctcaattcg
ctcgcgttgttgagcaatactccgcagccgtttgtgattgtggtgaccaataacgacggt
ggtgcaatttttgacttactgcccgtcccaaaacaacagaaaactgacttatatcagatg
ccacatggctatgatttccgacatgcagccgctcagtttggtttgcagtatgccaagcct
gaaagtgtcagcgcactgacggattgtgtcacacagcatatcgagcgcgggcagcatggt
ttggtggttgaagtcagtgtcccggccggagaggcagcacagcacattcagcaggttatt
cagcatgtctgtactttatag
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