Vibrio ruber: RND59_01070
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Entry
RND59_01070 CDS
T09542
Symbol
luxO
Name
(GenBank) quorum-sensing sigma-54 dependent transcriptional regulator LuxO
KO
K10912
two-component system, repressor protein LuxO
Organism
vru
Vibrio ruber
Pathway
vru02020
Two-component system
vru02024
Quorum sensing
vru05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RND59_01070 (luxO)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_01070 (luxO)
05111 Biofilm formation - Vibrio cholerae
RND59_01070 (luxO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vru02022
]
RND59_01070 (luxO)
Two-component system [BR:
vru02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
RND59_01070 (luxO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
AAA_19
AAA_22
TIP49
HTH_29
PIF1
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
WNJ95745
LinkDB
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Position
1:complement(214714..216114)
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AA seq
466 aa
AA seq
DB search
MQSEQLPQKSRYLLMVEDTASVAVLYRTYLEPLDIDINIVGTGKEALESLEKREPDLILL
DLRLPDMTGMDVLHEVKRKYPDVPVIFMTAHGSIDTAVEAMRYGAQDFLIKPCEADRLRV
TVNNAIRKASKIKSDSDDPRSQNYQGFIGSSQTMQAVYRTIDSAAASKASIFITGESGTG
KEVCAEAIHAASRRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLGYMSKEEEKDFVRLAAEVVERFRQYEW
PGNVRQLQNVLRNVVVLNQGKEITLSMLPPPLNQPKESYLRLVQPMMEDRKPSVHEIFPL
WMTEKMAIENAIDACEGNIPKAAGYLEVSPSTIYRKLQSWNAEENA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgaacagttaccacaaaaaagtagatatctgctgatggttgaagatacagcc
tcggttgccgtgctgtatcgaacctaccttgagcctctggatattgacatcaatattgtc
ggtaccgggaaagaggcattggagagtcttgaaaaaagagaacccgatctgatactgctt
gatttacgtcttccggatatgacagggatggatgttttacacgaggtgaaacggaaatac
ccggatgttcccgttatttttatgacagctcacggctcaatcgatacggctgtcgaagcc
atgcgctatggtgctcaggattttttaattaaaccatgcgaagctgaccgattacgtgtc
acggtgaataatgcaattcgcaaagcttcaaaaattaaaagtgattctgatgatccgcgc
agccaaaactatcagggattcatcggcagtagtcaaaccatgcaggctgtttatcgaacc
attgactctgcggcagcgagtaaagccagtatctttataaccggagaaagtggcaccggt
aaagaggtgtgtgctgaagccattcatgctgccagccgacgaggtgataaacctttcatt
gccattaactgtgccgcgattccgaaagatctgattgaaagtgagctgttcggtcatgtc
aaaggtgcttttacgggggccgcgactgatcggcagggtgctgccgagcttgctgatggc
gggacgctatttctggatgagctctgtgagatggatttggacttacagacgaaattattg
cgctttatccaaacaggtacattccagaaagtcggttcatcaaaaatgaaaagtgttgat
gttcgctttgtgtgtgcaacaaaccgtgatccgtggaaagaagttcaggaaggacgtttc
cgggaagatttgtactatcgtttatatgttatcccacttcatttgccgccacttcgggaa
cggggtgatgatgtcatcgaaatcgcttactctttactcggatatatgtccaaagaagaa
gagaaagattttgttcgtcttgctgctgaagttgtggaacggttcagacagtacgagtgg
ccgggcaatgttcgccagttacaaaacgttttacgtaatgtggttgtattgaatcagggt
aaagaaatcacgctgagcatgttaccaccgccgttgaatcagccgaaagaaagctatctt
cgtttggttcaaccgatgatggaagatcggaaaccttcagtccatgaaatatttccccta
tggatgacggaaaaaatggcaatcgaaaatgcgattgatgcatgtgaaggcaatatcccg
aaagcagctggctatttagaagtaagcccttcaaccatttatcgtaaattacaatcttgg
aatgcagaagagaacgcatag
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