Vibrio ruber: RND59_01205
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Entry
RND59_01205 CDS
T09542
Name
(GenBank) FimV/HubP family polar landmark protein
Organism
vru
Vibrio ruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
DUF5693
Motif
Other DBs
NCBI-ProteinID:
WNJ95769
LinkDB
All DBs
Position
1:complement(244060..250008)
Genome browser
AA seq
1982 aa
AA seq
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MRQFLKRLLLPLTIAAVGQIFLVHAEGIRLLGPTGQVQSSPQYSEAVRSSAAQSNNEPSK
FYGPTSETETLWSIASKLRPSNQVTVQQTLLALYQLNPESFEQQNIHSLIPGSRLRIPSL
VQIRSVTTEEATRVMQAHQQRLDQASRLASTGSASTAGSRTVKPAEPVSAKAETPPATQP
DTKPAQQADPQQESPPAEKIIPSEQPAQTEAPQSVLSFSSSDATGADSEILALEEKNHRL
TLMLSKVQAEVSDLKNELGDENKVRTEVEKLLAEERLKRAEAERMAPTSLDKLLSNGWAV
GALALIPGLLIALLVMWLVGRKKSSDTQSDMATEPKDVSDKPVSIGDTADGGDDELDDLS
LDDDLFSTTNPEAEENETQDEADTDDVFAELDDVDLDLDLGDESEEDLFASIDDDGDLVD
TDLDGDFSEGPNGISVNGEDKAVGLEEMERALEDASLASDDEEPAEREDFDLSGDDQIGM
SQDDIEALLDGDGLEDDLETDDLDQSMLDDLLAEEQDDEFDLGNAGVASDSDLEALFDSI
EQQADLEQLEANSQDDSFLDEAFDVPETSEDETESATDESTALLDELLDESDDLDDDELN
WDKELEDLGGLDLADDSDDTFDFETFDLDEDFDADTELDEDTAPIDDGTELFDELLEIEQ
HSAEEDDDFNREGFIDDLISSAPDKDPLLDEVDFEASASDDAEEDSDDFDFNPEIEGSDQ
VDEDEPVPANEFGVPQDTDWDLTEEPEPSTSSTTDDEDVTTSELSELDELAALSDADEPA
ALNESDAVQGDTDEPEQSDSDLTAEVDSAPEAQPSETPESSTAESPVAADNAPETDIDAE
ETIEPGATQAEAAPGQPEPDDLSDFIGDDALPEFDETAALDEFDAVQGDTDEPEQSDSEL
TAEADSASEAQPSETPESSTAESPVAADDASEADIDAEQTIEPEATQAEAAPEQPEPDDL
SDFIGDDALPEFDETAALDESDTVQDTDEPLQSDSDLTPEEQPSETPESSTAETPVAADD
APEADIDAEQTIEPEATQAEAAPEQPEPDDLSDFIGDDVLPEFDETAALDESDTVQDTDE
PLQSDSDLTGEADSAPEAQPSEAPESSTAESPVAADDASEADIDAEQTIEPEATQAEAAP
EQPEPDDLSDFIADDALPEFDETAALDQSDTVPDETDEPEQSDSDLTAEVDSAPEAQPSE
TPESSAAETPVAADETPETDIDAEQTIEPEATQAEAAPEQPEPDDLSDFIADDALPEFDE
TAALDQSDTVQDTDEPLQSDSDLTGEADSAPEAQPSEEPESSAAETPVAADDTPETDIDA
EQTIEPEATQAEAAPEQPEPDDLSDFIADDALPEFDETAALDESDAVPDDADEPVQSDSE
LTPEADSAPEAQPSEEPESSAAETPVAADETPETDIDAEQTIEPEATQAEATPEQPDPDG
LSDFIADDVLPEFDETAALDESDAVPDDADEPVQSDSELTAEADSAPEAQPSEAPESSAA
ETPVAADDTPETDIDAEQTIEPEATQAEAASGQAEPDDLSDFIADDALPEFDELAALNES
DVPQTDADEPAPEQPEPDDLSDFIDDDALPEFDETAALDESDAVQDETDEPEQSDSDLTA
EADSAPEAQPSEPEVTQAEAAPEQPEPDDLSDFIADDALPEFDELAALNESDVPQTDADE
PAPEPDDLSDFIADDALPEFDETAALDEFDAVQGDTDEPEQSDSDLTAEADSAPEAQPSE
PAESSAADAPDVAAETDFASEPSDFVDEETGLEHFPRTSIDEDVLGELLDENAEPEQYVF
EPNLDEDRIASAGMDFDSMLSMGGEDWNGFKLSPEQQASIPDEVPEEELDVWRTENQTDE
PQADSEDWEVQDDLFYNESGQQRHLTIDELMSQVEGHEHPFEEVDLKLDVGLNEFPDVIG
DITNVDVDSNAEAAGKLDLAKIYIEMNDEAGAVKLLEEAIVDGNDDIRQAAKRLIDGLNR
RS
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatttttaaaacgtctgttgttacctcttacaatagcagccgtgggtcagatt
tttcttgttcatgcagaaggtattcgtctgcttgggccgacaggtcaggtgcagtcatca
ccccaatacagtgaagcggtgaggtcttctgctgcacagtcaaataatgagccttcaaaa
ttttatggccccacttccgaaacagaaacactatggtcgattgcctcaaaactccgaccg
tcaaatcaagtgaccgttcagcaaacgctgcttgcactctatcagttaaatcctgaatcg
tttgaacaacagaatatacacagtttaattccgggaagccgcttacgcattccatcactc
gttcagatccgcagtgtcaccacagaagaagcaacgcgggtcatgcaggctcatcagcaa
cggctagatcaggccagtcgtcttgcatcaacgggctcggcctctacggcaggttcacgc
actgtgaaaccggcagaacctgtgtctgctaaagccgaaacaccaccggcaacacaacct
gatacgaagcctgcacaacaggctgatccgcagcaagagagcccaccggcagaaaaaatt
atcccgtcagagcaacccgctcagacagaagcgccacagtcagtgttgtcattctcatca
tcagatgcgacaggtgcagactcagaaattctggcgcttgaagaaaaaaaccatcgttta
acactcatgttgtcaaaagttcaggcagaagtgagtgacctgaagaatgaactgggtgat
gagaacaaagtccgtactgaagttgaaaagttactggctgaagagcgcctcaagcgtgct
gaggctgagcggatggcgcctacatcactagacaagctgttgtccaacggatgggcggtg
ggagccctcgctctgattcccggattactgatcgctctactggttatgtggttggttggc
cggaaaaaatcatcagatacacaatctgatatggcaactgagccgaaggatgtgagtgat
aaaccggttagtatcggagataccgctgatggtggtgatgatgaactcgacgatttgtca
cttgacgatgatctcttcagcacgacaaaccctgaagccgaagaaaatgagactcaggac
gaagccgatacagatgatgtgtttgcagaactggatgatgttgatcttgatttggatctg
ggggatgaaagtgaggaagatctgtttgccagcatcgatgacgatggtgatttagtcgat
actgatcttgatggtgacttctctgaggggccgaatggcatcagtgttaacggtgaagat
aaagctgttggtctggaagagatggaacgtgcgcttgaggatgcgtctctcgcttctgac
gatgaagagcctgctgaacgtgaagatttcgatctttccggtgacgatcagattggtatg
tctcaggacgatattgaagcactgctggatggtgatggacttgaagatgatttggaaacg
gatgatcttgatcagtcgatgctcgatgacctgctggccgaagaacaagatgatgaattc
gatctgggaaatgccggggttgcttctgatagcgatctggaagctttatttgacagtatc
gaacaacaggccgacctggagcagttagaagccaatagtcaggatgattcatttttagat
gaagcattcgatgtaccagagacatctgaagatgaaacagaaagtgctacagatgaaagt
accgcattgctggatgagctattggatgaatcggatgatttagacgacgatgagcttaat
tgggataaagaattagaagatctgggcggcttagatttagcggatgatagtgatgatacg
tttgattttgaaacctttgatcttgatgaagacttcgatgccgatactgagctggatgaa
gatacggctccgattgatgacggaacagagttatttgatgaattactagaaattgaacag
catagtgccgaggaagatgacgattttaaccgtgaagggtttattgatgatctgataagt
tctgcaccggataaagacccattattagatgaagttgattttgaagcatctgcttcagac
gatgcggaagaggactctgacgattttgatttcaaccctgaaattgaaggaagtgatcag
gttgatgaagatgagcctgttccagcgaatgaatttggagtgccgcaagatacggattgg
gatctgactgaagagccagaaccgtctacttcatcgaccacagatgacgaggatgtcaca
acatctgaattgtctgagttagatgagctggcagccctgagcgacgctgatgaaccggcc
gcactgaatgagtccgatgcagttcagggtgacaccgatgagccagaacaaagcgattca
gatctaacggctgaggttgattcagcacctgaagcacagccaagtgagacaccggaatca
tccacagcagagagtcctgttgcggccgataatgctcctgaaaccgacatcgatgctgag
gaaaccatcgagccaggagcgacgcaagcggaagccgcgcccggacaaccggagcctgac
gacttatctgattttatcggtgatgatgcgttgcctgaattcgatgaaacagcggcattg
gatgagttcgatgcagttcagggtgacaccgatgagccagaacaaagcgattcagaacta
acggctgaggctgattcagcatctgaagcgcagccaagcgagacaccggaatcatccaca
gcagagagtcctgtcgcggccgatgatgcctctgaagccgacatcgatgctgagcaaacc
atcgagccggaagcgacgcaagcagaagccgcgcccgagcaaccggagcctgatgactta
tctgattttatcggtgatgatgcgttgcctgaattcgatgaaacagcggcattggatgag
tccgatacagttcaggataccgatgagccactccaaagcgactcagatctaacgcctgaa
gaacagccaagtgagacaccggaatcatccacagcagagactcctgtcgcggccgatgat
gcccctgaagccgacatcgatgctgagcaaaccatcgagccggaagcaacgcaagcagaa
gctgcgcctgagcaaccggagcctgatgacttatctgattttatcggtgatgatgtgttg
cctgaattcgatgaaacagcggcattggatgagtccgatacagttcaggataccgatgag
ccactccaaagcgactcagatctaacgggtgaggctgattcagcgcctgaagcgcagcca
agcgaggcaccggaatcgtccacagcagagagtcctgtcgcggccgatgatgcctctgaa
gccgacatcgatgctgagcaaaccatcgagccggaagcgacgcaagcagaagccgcgccc
gagcaaccggagcctgacgacttatctgattttatcgctgatgatgcgttaccggagttc
gatgaaacggcggcactggatcagtctgatacagttccggatgaaaccgatgagccagaa
caaagcgattcagatctaacggctgaggttgattcagcgcctgaagcgcagccaagtgag
acaccggaatcgtccgcagcagagactcctgtcgcggccgatgagacccctgaaaccgat
atcgatgctgagcaaaccatcgagccggaagcaacgcaagcagaagctgcgcctgagcaa
ccggagcctgacgacttatctgattttatcgcggatgatgcgttgcctgaattcgatgaa
acagcggcattggatcagtccgatacagttcaggataccgatgagccactccaaagcgac
tcagatctaacgggtgaggctgattcagcgcctgaagcacagccaagtgaggaaccggaa
tcgtccgcagcagagactcctgtcgcagccgatgatacccctgaaaccgatatcgatgct
gagcaaaccatcgagccggaagcgacgcaagcagaagctgcgcctgagcaaccggagcct
gacgacttatctgattttatcgcggatgatgcgttaccggagttcgatgaaacggcggca
ctggatgagtccgatgcagttccggatgatgccgatgaaccagtccaaagtgactcagag
ctaacgcctgaggctgattcagcgcctgaagcacagccaagtgaggaaccggaatcgtcc
gcagcagagactcctgtcgcagccgatgagacccctgaaaccgatatcgatgctgagcaa
accatcgagccggaagcaacgcaagcagaagccacgcccgagcaaccggatcctgacggc
ttatctgattttatcgctgatgatgtgttgcctgaattcgatgaaacagcggcattggat
gagtccgatgcagttccggatgatgccgatgaaccagtccaaagtgactcagagctaacg
gctgaggctgattcagcacctgaagcgcagccaagcgaggcaccggaatcgtccgcagca
gagactcctgtcgcagccgatgatacccctgaaaccgatatcgatgctgagcaaaccatc
gagccggaagcaacgcaagcagaagcggcgtccgggcaagcggagcctgacgacttatct
gattttattgctgatgacgcattacctgaatttgatgaacttgcagcgctgaacgaatct
gatgtgccgcagactgatgcagatgagccagcgcccgagcaaccggagcctgatgactta
tctgattttatcgatgatgatgcgttgccggagttcgatgaaacggcggcattggatgag
tccgatgcagttcaggatgaaaccgatgagccagaacaaagcgattcagatctaacggct
gaggctgattctgcgcctgaagcacagccaagcgagccggaagtgacgcaagcagaagcc
gcgcccgagcaaccggagcctgacgacctatctgattttatcgctgatgacgcattacct
gaattcgatgaacttgcagcgctgaacgaatctgatgtgccgcagactgatgcagatgag
ccagcgcccgagcctgatgacttatctgattttatcgcggatgatgcgttgcctgaattc
gatgaaacggcggcattggatgagttcgatgcagttcagggtgataccgatgaaccagaa
caaagcgattcagatctaacggctgaggctgattctgcgcctgaagcacagccaagcgag
ccagcggaatcgtccgcagcagatgcaccggatgtcgctgcagaaactgacttcgctagc
gaaccatctgactttgttgatgaagagaccggccttgagcatttcccgagaacgtctatt
gatgaagatgtgttgggtgagttgttagatgaaaacgctgagccggaacagtatgttttt
gagccaaatctggatgaagatcggatcgccagtgcagggatggatttcgattcgatgctg
agtatgggcggagaagactggaatggattcaagctttctccggaacaacaagcatcgatt
cctgatgaagtaccggaagaagagctggatgtctggcgaactgagaaccaaacagatgaa
ccgcaggctgattcggaagattgggaagttcaggatgacttattctataacgagtctgga
cagcagcgtcatttaactatcgatgagcttatgtctcaggttgaaggacatgaacatcct
tttgaagaggtcgatctcaaactggatgttgggttaaatgagttcccggatgttatcgga
gatatcactaatgttgatgttgatagcaatgcagaagcagcaggaaagctggatcttgcc
aagatttatatcgaaatgaatgatgaagccggagcagtgaaattgctggaagaagcgatt
gttgatggcaatgatgatattcgtcaggctgcaaaacgcttgattgacgggctgaaccga
agaagttaa
DBGET
integrated database retrieval system
