Vibrio ruber: RND59_01395
Help
Entry
RND59_01395 CDS
T09542
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vru
Vibrio ruber
Pathway
vru00550
Peptidoglycan biosynthesis
vru01100
Metabolic pathways
vru01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RND59_01395 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RND59_01395 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vru01011
]
RND59_01395 (mrdA)
Enzymes [BR:
vru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RND59_01395 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vru01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RND59_01395 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WNJ95804
LinkDB
All DBs
Position
1:289998..291887
Genome browser
AA seq
629 aa
AA seq
DB search
MLRKRSQIRDYKSEDNLFRNRAIISFLAIIILVGVLIANLYTLQVVQFQDYRTRSNDNRI
KIVPIAPNRGLIYDRNGVLLAENRPIFDLEITPEQVDDMNATIQRLRQIIDISPEQVASF
RKELRQTRRFNSVPILTQLTPEEVAKFSVNQYKYPGVAVTARLKRYYPFGKMLTHVIGYV
SRINDRDIERLKREAKEANYQATRDIGKLGIERYYEDILHGMPGYQEVEVNSRGRVIRTL
KYVPPVPGKDLVLNIDINLQRYVYHLLDGKRGSAVVLDPKDNGVLAMVSSPSYDPNAFVH
GITTKDYQALLNDKDHPLVNRATLGIYPPASTVKPLIAVSALQEGVITPTTTRNDPGYWR
IPNSKTKPFRDWLRWGHGKVNITKALEESVDTFFYQVAYDMGIDRLSHWMKRFGYGEYTG
IDIFEESKANMPTREWKMARHRTPWYQGDTIPVGIGQGYWTATPMQISKAISVLVHHGKV
LAPHFLRATIENGEPFDKQQIAEVETYPPITGVPDKYWNIAINGMYLVNHGPRGTARHAF
KNLKYKSAGKSGTAQVFGLAEGEEYNADELAEHLRDHALFTGFAPVEHPQAIVTIVLENA
GGGSSHGAPVVRKIFDHIILDEDQQEKKD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcaaacgcagtcagatccgagactacaagtcagaagacaatctgtttcgaaac
agggctattatttcgtttttagcgattatcattctggttggtgtgctaatcgcaaacctg
tatacccttcaggtcgttcaatttcaggattacagaacccgctcgaacgataaccggatt
aaaattgttcccatcgctccgaaccgcgggctgatttatgatcgcaatggggtcttgctg
gcagaaaatcgtccgatcttcgatttggagattacaccggaacaagtcgatgatatgaat
gcgaccatccagcgtttaagacaaatcattgatatttcaccggaacaagtcgcatctttc
cgcaaagagttacgccagacccgtcgtttcaactccgtgccgattctgacccaactgacg
ccggaagaagttgctaaattttcggtcaatcagtacaaatatcccggtgttgcagtgaca
gcacgcctgaaacgttactatcctttcggtaaaatgctgactcatgtgatcggctatgtc
tctcggatcaatgaccgggacattgaacggctcaagcgcgaggcaaaagaagcgaactat
caggcaacccgtgatatcggtaaattaggtattgaacgctattacgaagatattctgcac
ggaatgccgggttatcaggaggttgaagtcaacagccgcgggcgggtcatccgcaccctt
aaatatgtccctccggtgccgggcaaggatctggtgctgaatatagatatcaaccttcag
cgttacgtttatcacctgcttgacggaaaaagaggctccgctgtcgtcctcgaccccaaa
gataatggcgtactggcaatggtttccagccccagctacgaccccaatgcttttgttcat
ggtatcaccaccaaagattaccaggcactgctgaatgataaagatcacccgctggtcaat
cgcgccaccctagggatttacccaccggcatccactgtcaaaccattaattgcagtctcc
gcgttacaagaaggcgttatcaccccgacgacgactcgcaatgatccgggctactggcgc
attcccaactccaaaaccaaacctttccgggattggttaagatggggacacggtaaagtc
aatatcacaaaagcactggaagagtctgtcgataccttcttctatcaggttgcttacgat
atgggtattgatcgtctctctcactggatgaaacgattcggttacggggaatataccggg
attgatatcttcgaagaaagtaaagccaatatgccgaccagagagtggaaaatggctcgc
caccgcacgccttggtatcagggagatacgattcccgtcggtatcggtcagggctattgg
actgcaaccccaatgcaaatttccaaagcgatctcggtgttagttcatcacggaaaagtg
ctggcaccgcattttctccgggcaacgattgaaaatggtgagccgtttgataaacagcag
atagctgaagttgaaacctatccgcctatcaccggcgtacctgataaatactggaatatc
gcaatcaacgggatgtatctggttaatcatggcccccggggaaccgcccgtcatgcattt
aagaaccttaaatacaaaagtgccggaaaatcaggaaccgcgcaggtcttcgggctcgca
gaaggggaagaatataatgcagacgaactcgcagaacatttgcgtgaccatgcactgttt
accggatttgcccccgtcgaacatccgcaagccattgtgacaatcgtattggaaaatgcg
ggaggcggttccagtcatggcgctccggttgtgcgcaaaatatttgatcatataattcta
gatgaagaccaacaagagaagaaagactaa
DBGET
integrated database retrieval system
