Vibrio ruber: RND59_03090
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Entry
RND59_03090 CDS
T09542
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vru
Vibrio ruber
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vru03016
]
RND59_03090 (truB)
Enzymes [BR:
vru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RND59_03090 (truB)
Transfer RNA biogenesis [BR:
vru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RND59_03090 (truB)
Prokaryotic type
RND59_03090 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WNJ96111
LinkDB
All DBs
Position
1:complement(680371..681309)
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AA seq
312 aa
AA seq
DB search
MARRRKGRPVDGIILLDKPTGISSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKKYRVIAKLGVRTNTSDSDGEIVETRPVQISESLLMQSIEKFKGETAQ
IPSMFSALKYQGRPLYEYAREGVEVPRESRQITVYSIELIRYEADEVEMEIHCSKGTYIR
TIVDDLGEMLGCGAHVTYLRRTAVAQYPAERMVTIDELENILEAAREQDVAPRVLLDPLL
LPMDSAVQSLPEINLIPDLAEMVQKGQAVQVFGIPTSGTVRLTAGEEQRFIGVGEIDDDG
KIAPKRLVVFRQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgaaaaggtcgtccggttgacggtatcattttattggataaacctacg
ggaatttcatccaatgatgcactccagaaagtgaagcgaattttctttgcggaaaaagcc
ggtcatacaggcgcattagatcctttagcgaccggtatgctgccgatttgtctgggagaa
gcaaccaagttttctcagtttcttctcgactccgataaaaaatatcgggtaattgcaaag
ctcggtgtgcggaccaatacatcggattctgatggcgaaattgttgagactcgccccgtt
caaatctccgaatcgttgctgatgcaatcgatcgagaaatttaaaggcgaaaccgctcag
attccttccatgttttcggcattaaagtatcaaggtcgtcctttatacgaatatgcacga
gaaggtgttgaagttccgagagagtcgcgccagatcactgtttattccatcgaattgatc
cgctatgaagcggatgaggttgagatggagattcattgttccaaaggaacctatatccgt
actattgtcgatgatctcggtgaaatgttaggttgtggtgcccatgtgacgtatttacgc
cgtacggctgttgcgcagtatccggcagagcggatggtgactatcgacgagcttgaaaat
atcctcgaagcagcgcgtgaacaggatgtcgcaccaagagttttactcgatccgctcctg
ttaccgatggattccgcggttcagtcattaccagaaataaatctgatacctgatttggca
gaaatggtccagaaaggtcaggctgttcaggttttcgggataccgacaagcggtactgtg
cgtttgactgccggtgaagaacaacgctttatcggtgtcggtgaaatcgatgatgacggc
aaaatagcgccaaaacgattagtcgtttttcgtcaatga
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