Vibrio ruber: RND59_03360
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Entry
RND59_03360 CDS
T09542
Name
(GenBank) LuxR/HapR/OpaR family quorum-sensing transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vru
Vibrio ruber
Pathway
vru02020
Two-component system
vru02024
Quorum sensing
vru05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RND59_03360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_03360
05111 Biofilm formation - Vibrio cholerae
RND59_03360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vru03000
]
RND59_03360
Transcription factors [BR:
vru03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RND59_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_11
LacI
Motif
Other DBs
NCBI-ProteinID:
WNJ96160
LinkDB
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Position
1:739929..740549
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AA seq
206 aa
AA seq
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MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPT
REDLVDDVLTHVVHQFSNFLADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSA
STRDEVWPLFVSTNHTNRLLVKNMFVNAIERGDVSDHYDSEHLVTLFLGIFYSLFVQVNR
LQDQKEIDDLVNSYLDMLCIYNNRRA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcaatagaaaaacgccctcgtacacgattatcacctcagaaacgtaaactt
cagttaatggaaattgcgcttgaagttttcgccaaacgaggtatcggacgtggtggacat
gcagatatcgctgagattgctcaggtttctgttgcaactgtatttaactatttcccaacg
cgtgaggatttagttgatgatgtgctcactcatgtcgttcaccaattctcaaacttcctc
gcagacaatattgatgtagacagttatatcaaagataacctctatcatctcacacataaa
atgacaaaattggtatttgaagattgtcattggctgaaagtgtggtttgagtggagtgca
tcaactcgcgatgaagtctggccgctattcgtatcgaccaaccatacgaaccgcctgctg
gtgaaaaacatgtttgtcaacgcaatcgaacgcggtgatgtcagcgatcattatgattct
gagcacttagtcaccctgttcctcgggattttctactctctgtttgttcaagtaaaccgt
ttacaagatcaaaaagagattgatgatctggtgaacagctatctggacatgttatgcatt
tataacaaccgtcgggcttag
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