Vibrio ruber: RND59_04625
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Entry
RND59_04625 CDS
T09542
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vru
Vibrio ruber
Pathway
vru00550
Peptidoglycan biosynthesis
vru01100
Metabolic pathways
vru01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RND59_04625
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RND59_04625
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vru01003
]
RND59_04625
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vru01011
]
RND59_04625
Enzymes [BR:
vru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RND59_04625
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RND59_04625
Glycosyltransferases [BR:
vru01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RND59_04625
Peptidoglycan biosynthesis and degradation proteins [BR:
vru01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RND59_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WNJ96387
LinkDB
All DBs
Position
1:992636..995194
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AA seq
852 aa
AA seq
DB search
MKFIKRLFLFSLICMVLGVSTIFGFYYYVKPELPDVATLKDVQLQTPMQVFSKDGKLIAQ
FGEKRRIPLKLSDIPPDLIHAFLATEDNRFYEHYGFDPIGITRAAFAVILSGSASQGAST
ITQQLARNFFLTNEKKIMRKIKEIFIAVHIEQLLTKDEILELYLNKIYLGYRSYGVGAAA
QVYFGKNVKDLTLGEMAMIAGLPKAPSTMNPIYSLSRATHRRNVVLMRMLDEHYITQEQY
DSAKAEPLVARYHVAEIEVNAPYVAELARAWMVAHYGEDAYTSGMRVTTTIQSDLQDAAH
KAAINNLIAYDQRHGYRGAEKVLWKDGQPALTQEQMEESLTEQPIYDDMYPAIVTNVAQQ
SATVWVKNHGTQTIPWDGMKWARRFITDDRQGDAPTNAHEILAAGEQIWVRKLDDTQDDS
QPIWHLSQVPNANTAFVAMNPEDGAVLALVGGFNFIHSKFNRVTQSIRQVGSGIKPFIYS
SAIDDGLTLATLINDAPINKWDQSQGTAWRPKNSPPTYRGPTRLRIGLAQSKNVMAIRVL
REVGLERVRHYLTRFGFDLDNLPHSETIALGAGSLSPLKLVQGYSVFANGGYSVDAYYID
HIEDPFGTQVYRSTPKIVCHDQCPDQDSDADSQDQGENAQQEDIPQGISAPSRFNEHSAD
VQYASRVISEQNAFLVREMMYSNIWGGGNWREGTGWNGTGWRAQKLKRRDIGGKTGTTND
SKDAWYNGFAPGIVASAWVGFDSHNRDLGRTTKNPNLDDVPISGGESGAKTAEPAWIDFM
AHALNDVPPHEKVIPKHIVQVRIDRDTGLLTTKTDGSAMFEYFIQGTEPKEYVQDSVTNS
LYTSPNDGEELF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcataaagcgattatttttattttcattgatttgcatggttttaggggtgagt
acaatttttgggttttactactatgtaaaaccagaattacccgatgtcgccaccttaaaa
gatgttcagcttcaaacgccaatgcaggttttcagtaaagatggaaaactgattgcccaa
tttggagaaaaacgccggattccactcaaactgagtgatattccaccagatttgatccat
gcctttctggccaccgaagataatcgcttttatgagcactacgggtttgacccgatcggg
attacccgtgcggcatttgccgtcatcttatccggtagcgcatctcaaggtgcgagtacc
attactcagcaacttgcccgtaatttcttcctcaccaatgagaagaaaatcatgcgcaag
ataaaagagatttttattgcggttcacattgaacagttactgacaaaagacgaaattctt
gaactgtatttgaataaaatctatctgggttatcgctcttatggggttggtgctgcggca
caagtctatttcggtaaaaatgtcaaagacctcacactgggcgaaatggcgatgattgcc
ggattgcctaaagccccgtcaaccatgaaccctatctactcactgagccgggccactcat
cgccgtaatgtggttctgatgcgtatgctcgacgaacactatattacgcaggagcagtat
gactcggcaaaagcagagccattggtcgcgcggtatcatgtcgctgaaattgaggtcaat
gccccttatgttgctgaacttgcacgggcatggatggtggcacactatggtgaagacgcc
tacacatcagggatgagagtgaccacaaccatccaatccgatttgcaagacgctgcgcat
aaagcagcgatcaataatttgatcgcctatgatcaacgccatggctaccgcggtgcggag
aaagtattgtggaaagacggtcagcctgcattgactcaggaacagatggaagaatctctg
acagagcagccgatctatgacgatatgtatccggcgattgtgacgaatgtagcgcaacag
tcagcgacggtctgggtcaagaatcacggcacgcaaaccattccctgggatgggatgaaa
tgggcccgacgatttattaccgatgatcgacaaggggatgccccgaccaatgcccatgaa
attctggcggcgggagagcaaatctgggtgagaaagctcgatgatacacaagatgacagc
cagcctatctggcatctcagtcaggtgccgaatgccaacacagcttttgtggcaatgaat
cctgaagatggcgccgttcttgcgctggtcggcggtttcaatttcatccacagtaaattc
aaccgcgtgacacaatcgattcgtcaggttggttccggaattaagccgttcatctactcg
tccgccattgatgatggtttgacgctggcaacgctgatcaatgatgcaccaatcaataaa
tgggatcagagtcagggaacagcatggcgccctaaaaattcaccaccgacatacagaggg
ccgacacggctacggattggattagcacaatcgaaaaacgttatggcaatccgtgtgctc
agagaagtgggtctggaacgtgtcagacattatctgacacggtttggcttcgatctggac
aacctgcctcattcagaaaccatcgcactgggagcgggaagtctgagcccgttgaagctg
gtgcagggatattcggtatttgccaatggcggctatagtgttgatgcctattatattgat
catatcgaagaccccttcggtacacaggtctatcgctcgacaccgaaaattgtctgccat
gatcaatgtcctgatcaggacagtgacgctgattcacaagatcaaggagagaatgcccaa
caagaagatattcctcaagggatcagtgctccgtctcgctttaatgaacactcggcagat
gtccaatatgcctcacgcgtcatctcggaacaaaatgcctttttggtccgggaaatgatg
tatagcaacatttggggtggcggaaactggcgagaaggaacaggctggaacggcaccgga
tggcgggcgcaaaaactgaaacgtcgggatattggtggtaaaaccgggacaaccaacgat
tcgaaagatgcttggtataacgggttcgcaccggggatcgttgccagtgcctgggtcggc
tttgacagtcacaaccgggatctaggccgcaccactaaaaatccgaacctcgacgatgta
ccgattagcggcggggaatctggtgccaaaacagcagaaccggcttggatcgatttcatg
gcacatgcactcaatgatgtgccgccgcacgaaaaggtgattccgaaacatattgttcag
gtcagaattgatcgcgataccgggttgttgacgacgaaaaccgatggcagtgcgatgttc
gagtactttattcagggcaccgaaccaaaagaatatgtgcaggattcagtgacgaatagt
ctgtacacctcgccaaatgacggtgaagaactgttttag
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