Vibrio ruber: RND59_04815
Help
Entry
RND59_04815 CDS
T09542
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vru
Vibrio ruber
Pathway
vru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RND59_04815 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vru03400
]
RND59_04815 (priA)
Enzymes [BR:
vru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RND59_04815 (priA)
DNA repair and recombination proteins [BR:
vru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RND59_04815 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
SIR2
cobW
PriA-like_WH
Motif
Other DBs
NCBI-ProteinID:
WNJ96423
LinkDB
All DBs
Position
1:complement(1033304..1035508)
Genome browser
AA seq
734 aa
AA seq
DB search
MHPSIARVALPVPLDKQFDYLIPAHCQPVIGGRVSVPFGRQTLIGIVTELGHNSEMSPDV
LKPIRSVLDDRPVWSASLFRLFTWCSQYYQYPLGDTLSNALPAALRKGKAADFATLREWC
LTSAGRDKLMQGLGRAVQQAKVLRLLENGTQSHQTLLDEDISRQVLNTLEEKGWIEAIDR
KPDRQPWPELLEDEDEKPQLNMEQSVAIATINSQHEFGCYLLEGVTGSGKTEVYLNLIAP
MLKQGKQALVLVPEIGLTPQTIQRFRSRFMVPVVVMHSGLNETERLNAWLSARDGHAGVI
IGTRSALFTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRASYEQIPIVLGSATPA
LETLQNALSGKYHHLTLTQRAGDAVPTTNRVLDIKGLYLEGGLSAPLIAEMRKHLQAGNQ
VLLFLNRRGYAPVLMCHECGWVAHCQRCDARYTYHQITQELRCHHCGSQRPVFPQCHDCG
STQMATVGVGTEQLETQLAQIFPQYRTIRIDRDSTRKKGTLESALNAVHRGEYHILIGTQ
MLAKGHHFPRVTLVGLLDVDSALYSHDFRASERLAQLFIQVAGRAGRASQPGEVVLQTHH
PEHSLLQALLKKDYRHFAMSALHERKLALLPPFSYLTLFKAESNQAELGEDFLRQVKQTL
EIHPLFDHATCSVLGPSPAPMAKRAGKYRWQLLMQTMSRPMMQKLLMSAKPVIQRLPLAG
KVRWSLDVEPHDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatccattgcccgagtggcattaccggttcctttagataaacagttcgactat
ttgatccctgcacattgtcagcctgttatcggtggacgggtttccgtgccgtttgggcgg
cagacattgattggtattgtgaccgaacttggccataactctgaaatgagccccgatgta
ctgaaaccgattcgctctgtgctggatgatcggcctgtctggtcggctagtctgtttcgg
ttattcacatggtgcagccaatattatcagtatccactcggggataccttgtcaaatgcg
ttacccgcagccctgagaaaaggtaaagcagctgatttcgcgaccttacgggagtggtgt
ctgacttccgccggacgagataagttgatgcagggacttggccgtgcagtccagcaagcg
aaggttttgcgtttattggaaaacggcacacaaagtcatcaaacattgttagatgaagat
atcagtcgtcaggttttgaacacgcttgaggaaaaagggtggattgaagcgattgaccgg
aagcctgaccgccagccatggcctgaattactcgaagatgaggatgaaaagccacaattg
aatatggagcagtctgttgcgattgcgactatcaacagccagcacgaatttggttgctat
ttattggaaggcgtcactggttcgggaaaaacggaagtctacttgaacttaattgcaccg
atgctgaaacaggggaaacaagcactggttctggtgcctgaaatcggtttgacaccacaa
acgattcagcggttccgctctcggtttatggtgccggttgtggtgatgcattccggactc
aatgaaacggaaagactcaatgcatggctctctgcccgggatggtcatgccggtgtgatc
attggtacgcgttctgcgttgtttacaccgtttgccgatctgggaatcattattgtcgat
gaagaacatgacgcctcatataaacagcaggatagtttgcgttatcatgcgcgggatgtg
gcggtcatgcgtgccagctatgaacagattccgattgttttgggctcagcgacaccggca
cttgagaccttacaaaatgcactcagtggtaaataccatcatttaacgctgacacagcgg
gccggcgatgcggtaccgaccaccaaccgggttctggatattaaaggactctatcttgaa
ggcgggctgtcagccccgttgattgctgagatgagaaaacatttgcaggctggtaatcag
gtcttgctattccttaaccgacgcggatacgcaccggttctgatgtgccatgagtgtggc
tgggttgcccactgtcagcgttgtgatgcgcgttatacctatcatcagataacacaggaa
ctgcgttgccaccactgtggctctcagcgtccggtattccctcaatgtcatgattgtggt
tcaacgcagatggcgacggttggcgtcggtaccgagcagttggagacacaactggcgcaa
atttttcctcaatatcggacgatccggattgaccgcgacagcacccggaaaaaaggcacg
ctcgagtctgccctcaatgctgtccaccgtggggaatatcatattttaatcgggacgcag
atgttggcaaaaggccatcatttcccgcgcgtgacattggttggcttgctggatgtcgac
agtgctttgtacagtcatgacttccgggcgtcggaacgattggcgcagctgtttattcag
gtcgccggtcgcgccggtcgagccagtcagcccggtgaggtagttcttcagacgcatcac
ccggagcacagtttgctccaagcgctgctcaaaaaagattaccgtcactttgcgatgagc
gcgttacatgagcggaaactggcattattgccgcctttcagttatttgactttatttaaa
gcggaatcaaaccaggccgaacttggcgaagattttctcaggcaagtgaagcagactctg
gaaattcatccgctgtttgatcatgctacctgctcggtcttaggcccatccccggcaccg
atggcgaaacgagccggtaaatatcgttggcagctattgatgcaaaccatgagccgcccg
atgatgcaaaaattgctgatgagtgccaaacctgtcattcagcgcttacctctcgcggga
aaagtccgttggtcgctcgatgttgaacctcatgatttgtcataa
DBGET
integrated database retrieval system
