Vibrio ruber: RND59_05235
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Entry
RND59_05235 CDS
T09542
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vru
Vibrio ruber
Pathway
vru00541
Biosynthesis of various nucleotide sugars
vru01100
Metabolic pathways
vru01250
Biosynthesis of nucleotide sugars
Module
vru_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RND59_05235 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vru01005
]
RND59_05235 (rfaD)
Enzymes [BR:
vru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RND59_05235 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vru01005
]
Core region
RND59_05235 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
ThiF
NAD_binding_10
KR
adh_short
Phage_T7_Capsid
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WNJ96503
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All DBs
Position
1:1131706..1132647
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDKGFDDILVVDHLKNGKKFKNLVDLSIADYMDRDDFLAQI
MAGDDFGPIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLEREIPFLYASSAATY
GETKTFIESPEYEGALNVYGYSKQQFDNYVRRLWKDAEENGEKLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQMKAGENPKLFEGSHHFIRDFVYVGDVCQVNLWFWEQGISGIFNC
GTGKAESFEEVAKAVIKHHGRGSVETIPFPDHLKGAYQEFTQADLTKLRAAGCDIVFKTV
AEGVSEYLHIINQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaaccggcggtgctggcatgattggcagcaatatcgtaaaagccctgaat
gacaaaggatttgacgatatccttgtcgttgaccatctcaagaacggcaaaaaattcaaa
aacctcgttgacctgagcatagcagactacatggatcgtgatgattttttagcacaaatc
atggctggtgatgatttcggtccgattgaagcggtctttcacgaaggcgcttgttccgcg
acaaccgaatgggatggcaagtacatgatgctcaataactatgagtattcaaaagaactg
ctccattactgtctagaaagagaaattccctttctctatgcttcatccgctgccacttac
ggggaaacaaagacgttcatcgaatcacctgaatatgaaggcgcgctgaatgtctatggc
tactccaagcagcagtttgacaactacgttcgtcgtctctggaaagatgctgaagaaaac
ggtgaaaagctttcacaaattaccggatttcgctacttcaatgtttatggtcctcgcgag
gatcataaaggttcaatggcatctgtcgccttccacctcaacaatcagatgaaagcgggc
gaaaatccaaagctgtttgagggaagtcatcactttatccgtgactttgtttatgtcggt
gatgtgtgtcaggtgaatttatggttctgggaacagggtatttccgggattttcaactgt
ggtacaggaaaagccgagtcatttgaagaagtggcaaaagctgtgattaagcatcatggt
cgtggttcggttgagacgattccgtttcccgatcatctgaaaggtgcttatcaggagttt
acgcaagccgatctgaccaagctaagagcagcaggatgtgacattgtgttcaaaaccgtt
gctgaaggtgtctcagaatatttacatatcattaatcagtag
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