Vibrio ruber: RND59_07025
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Entry
RND59_07025 CDS
T09542
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vru
Vibrio ruber
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vru03021
]
RND59_07025 (rpoH)
Transcription machinery [BR:
vru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RND59_07025 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
2Fe-2S_thioredx
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WNJ96819
LinkDB
All DBs
Position
1:1507145..1507999
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AA seq
284 aa
AA seq
DB search
MTNHTYPMAVVTQDSLDSYIRSVNSYPMLSAEEEHELAERLHYKGEIEAAKGLILSHLRF
VVHIARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNHSEVETVAKELGVEPSEVREMESRLAAQDA
TFDMTVDDDEGNAASAPVLYLEDKNSDVAENLESTNWEQHTNHRLSLAISSLDERSQHIV
RSRWLDEPKATLQDLADNYGVSAERIRQLEKNAMKKLKEAVGEM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccatacgtatccaatggcagttgtgacacaagatagcctggacagctatatc
cgttctgtgaatagttatccgatgctgagtgcagaagaagaacatgagcttgcggaacga
ctacattacaaaggtgaaattgaagccgcgaaaggtttgattctgtcgcatcttcgtttc
gtcgttcatattgctcgtggttattccggttatggattaccgatggcagatctggttcag
gaaggcaatatcggcttgatgaaagcggtcaagcgtttcaatcctgaagtcggcgttcgt
ctggtctcttttgccgtgcactggattaaggctgaaatccatgaatatgttctgcgtaac
tggcgcatcgtcaaaatcgcaacgacgaaagcgcaacgcaaactgttctttaatttaaga
aagtcgaaaaagcgtctgggttggtttaaccatagtgaagttgaaactgtggcgaaagag
ctgggggttgaaccgtcagaagttcgggagatggaatctcgtttggcggctcaggatgca
acctttgatatgaccgttgatgacgacgaaggtaatgcagcttctgcgccggtactttat
cttgaagataaaaattctgatgtggctgaaaatctggaaagcacgaactgggaacagcat
accaaccatcgcttgtctttagcgatatcgagtctggatgagcgtagccagcatattgtg
cgctctcgttggttagatgagcctaaagcaacactacaggatttagccgataattatggt
gtatccgctgagcgtattcgccagctggaaaaaaatgccatgaagaaactgaaggaagct
gtcggagaaatgtag
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