KEGG   Vibrio ruber: RND59_07320
Entry
RND59_07320       CDS       T09542                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vru  Vibrio ruber
Pathway
vru03070  Bacterial secretion system
vru05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vru00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RND59_07320 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    RND59_07320 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vru02044]
    RND59_07320 (gspD)
Secretion system [BR:vru02044]
 Type II secretion system
  General secretion pathway protein
   RND59_07320 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: WNJ96866
LinkDB
Position
1:1576322..1578355
AA seq 677 aa
MKYWLKKSAWLLLGSMMLSPVALANEYSVNFKGTDIQEFINIVGRNLHKTIIVDPSVRGK
IDVRSYDTLSDDQYYGFFLNVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLDSSGNTD
ADSVITRVVSVHNVSVKELSPLLRQLVNNAGSGNVVHYEPANIILLTGRAAVVDRLAQII
ERVDQAGNTDIDVVTLTNASAPEIVRIVSALDTNKETRSLPQILQPQVVADDRTNSILIS
GDPKVRKRIVRLIKRLDIEMATKSNHRVVYLKYAKAEDLVDVLKGVSDNIQSEKQGEQKS
APSSRTDVTIAAHKDTNSLILSAPQDIMKPLLDVISQLDIRRAQVLIEALIVEMSEGEGI
NLGVQWGSIESGSEIQFGNSGASIGKVMVGLEEAKDQVSTEYYTDNNGNRRPYTTTESGD
YKSLSDALSGVEGAAVSIVMGDWTSLISAVSKDSSSNILSSPSITVMDNGEASFVVGEEV
PVLTGATSSSGNDNPFQTVDRKEVGIKLKVVPQINEGDSVLLNIEQEVSNVLAANGAVDV
RFAKRQLNTSVMVKDGQMLVLGGMIDERTQESDSKVPLLGDIPLLGYLFRSTSTKVEKRN
LMVFIKPTIIRDGMTADGVTQRKYNFIRAEQLVKAEKGLKLMGDKKTPVIPAFNLQSHYP
EELQAFLEQVPKDQEQE
NT seq 2034 nt   +upstreamnt  +downstreamnt
gtgaagtattggctaaaaaaaagcgcgtggctgttgttagggagtatgatgctttctccg
gtagctttggcgaacgagtacagcgtcaattttaaaggcactgatattcaggaatttatt
aacattgtcggtcgtaatttacataaaacaattattgttgatccgtccgtacgcggcaaa
atcgatgtacggagttatgacacgctcagtgatgaccaatactacggtttctttctgaat
gttttggaagtttatggttttgccgtggttgaaatggacaacggtgtactgaaagtcatt
aaatcgaaggatgcgaaaacctcagctattcctgtattggattcatccggtaacaccgat
gctgacagtgtcattacccgtgttgtttcggtgcacaatgtgtcggttaaagagttatct
ccgctattgcgtcaattagtgaataatgctggctccggtaatgtggttcactatgaacct
gcgaatatcattttgctgaccgggcgtgccgcagttgtggatcgcttggcgcaaattatt
gagcgggttgaccaagccgggaacacggatattgatgtggtaacactgaccaatgcttca
gcaccggagattgtacgaattgtcagtgcgcttgataccaataaagaaacaagaagcctg
ccgcaaattcttcagccgcaagtggttgctgatgatcggacgaattcgatcctgatctcc
ggagatccgaaagtcagaaagcgaatcgtacggttaattaaacggcttgatatcgaaatg
gcaaccaagagtaaccaccgggtggtatatctgaagtatgcgaaagctgaagacttggtc
gatgtgctgaaaggtgtctctgataatattcagtcggaaaagcagggagagcaaaaatcg
gctccctccagtcggacggatgtcaccatcgctgctcacaaggacaccaactctctgatt
ctgagtgcgccgcaagatattatgaagcccttactggatgtgatcagccagttagatatt
cgtcgggctcaggtactgattgaagctttgatcgtcgaaatgtctgaaggtgaagggatt
aatctcggggttcaatggggttcgattgaaagcggttcggaaatccagtttggtaacagt
ggcgcttctatcggtaaggtgatggttggtctggaagaagcaaaagatcaggttagcact
gagtattacaccgataataatggtaatcgtcggccttatacgacgacagagtccggtgac
tataagtcgttgtctgatgcattgagtggtgtagaaggtgccgcggtcagtattgtgatg
ggtgactggacatcgctcatcagtgcggtttccaaagactccagttccaatatcttatca
tcaccgagtatcacggtcatggataacggtgaagcttcatttgtggtcggtgaagaagtt
cctgtgctgactggggcaacctcaagctccgggaatgacaatcctttccaaactgttgac
cgtaaagaggtcgggattaaattaaaggtagttccccaaatcaatgaaggggattcagtt
ctgctcaatatcgagcaggaagtctcgaatgtgctggccgctaatggtgcagttgatgtc
cgttttgccaaacgtcagttaaacacctcggtcatggtcaaagatggtcaaatgctggtc
ttgggcgggatgatcgatgaacgcactcaggaaagtgactcgaaagttcctttactcggc
gatattcctttgctgggatacctattccgttcaaccagcaccaaagttgaaaaacgcaat
ctgatggtctttattaagccgacaatcattcgtgatggcatgacagcagatggtgtcact
caacgcaaatataacttcattcgggctgagcagctggtcaaagccgaaaaaggtctgaaa
ttaatgggtgataagaaaacgccggtgatccctgcgtttaatcttcagagtcattatccg
gaagaattacaggcatttctcgaacaggttccaaaggatcaggagcaggagtag

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