Vibrio ruber: RND59_08160
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Entry
RND59_08160 CDS
T09542
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
vru
Vibrio ruber
Pathway
vru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RND59_08160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vru03400
]
RND59_08160 (uvrA)
DNA repair and recombination proteins [BR:
vru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RND59_08160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RND59_08160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
T2SSE
AAA_25
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
WNJ94155
LinkDB
All DBs
Position
1:1788132..1790954
Genome browser
AA seq
940 aa
AA seq
DB search
MDSIDVRGARTHNLKNISLTLPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGEPRC
PEHHTPLAAQTISQMVDKVLELPEGTRMMLLSPIVKERKGEHVKTLANLAAQGFIRARID
GEISDLSDPPTLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVLVTSMDEA
GDEIVFSSNFACSHCGYSMQELEPRLFSFNNPAGACHTCDGLGVQQYFDPSRVVQDKSLS
LANGAIRGWDKKNFYYFQMLTSLAEHYDFDLTTPFEKLPKKIQNVILQGSGTQSIEFKYV
NDRGDTRIKSHPFEGILSNLERRYRETESNSVRDDLIKFISTKPCASCHGTRLREEARHV
FVNETSLPEVVELSIAEALTFFESLQLTGQKAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRDLGNTV
IVVEHDEDAIRMADYIVDIGPGAGVHGGHIVAQGNVEEVIATPDSLTGQYLSGAKSIAIP
TQRTPFDAKKVVELSGACGNNLKDVALTIPVGLLTCVTGVSGSGKSTLINDTFYKIAHIE
LNGASAEEPAPYKKIKGLELLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDICKGKRYNRETLEVKYK
GKTIDEVLEMTVEDARTFFDPVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADWI
VDLGPEGGQGGGEIIAQGTPEDVSKVAGSHTARFLKPMLE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggatagtattgacgttcggggcgctcgtacccacaatttaaaaaatatcagtctgaca
cttccgcgtgacaaacttatcgtcgtcacagggttatccggttcaggaaagtcttccctc
gcttttgacacgctgtatgcggaggggcaaagacggtatgttgagtctctgtcggcttat
gcacgacagtttctgtctttgatggaaaaaccggatgttgatcatattgaaggtttgtct
ccagccatatcgattgaacaaaaatcaacctcacataacccgcgttcgaccgtcggtacc
atcaccgaaatctacgattacctgcgcttactttatgcccgggtcggggaacctcgctgt
cctgaacatcatactccgctggctgcacagacaattagtcagatggttgataaagtcctg
gagcttcctgaagggacaagaatgatgttgctttcgccaattgttaaagagcggaagggt
gaacatgtcaaaacgctggcaaatcttgcagctcaagggtttattcgtgcccggattgat
ggtgaaatcagcgatctttctgatccaccgacattagagctgcataaaaaacatactata
gaagtgattgttgatcgctttaaagtccggtcagatttgcagcagcgtttggctgagtct
tttgaaaccgcgttagaactgtctggtggtattgtgcttgtcacttcgatggatgaagcg
ggagatgaaatcgtattctcatctaattttgcctgttcacattgtggctatagtatgcag
gaactggagccgcgactgttttcgtttaataatccggccggggcttgtcacacctgtgat
ggcttaggcgtccagcagtattttgacccgtcccgggttgttcaggataaaagtctcagt
ttggcaaatggcgcgattcgtggctgggataaaaagaacttctattattttcaaatgctg
acatctctcgctgagcattatgattttgatttgacgacacctttcgaaaaactaccgaag
aaaatccaaaatgtcattctgcaaggatcagggacccagtcgattgagtttaaatacgtc
aatgatcgcggtgatactcggataaaatctcatccttttgaaggcattctgagtaatctg
gaaagacgctatcgcgaaactgaatcgaattcagttcgggatgatctgattaaatttatt
tcgaccaaaccttgtgccagttgtcacggaacccggcttcgggaagaagctcgtcacgtg
tttgtcaatgaaacttctcttcctgaagtcgttgagctgagtattgctgaggcactgact
ttctttgagtcgttacagcttaccggacagaaagcacaaatcgctgaaaaggtcatgaaa
gagatcaatgatcggctccagtttttggtgaatgtcggtctgaactatctcaacctttca
cgaagtgctgagacactatccggcggggaggcacaaagaatccgcttggcgagtcaaatc
ggagccggtttagtcggggtgatgtacgtgcttgatgaaccctcgattgggttgcatcag
cgcgataatgaaaggttactgcaaacgctgacacatctgcgtgacttagggaataccgtg
attgtcgttgaacatgatgaggatgccattcggatggctgactacattgttgacattggt
ccgggagcgggggtacatggcggacacattgttgctcagggcaatgttgaagaagtgatt
gcgacaccagattcgttaaccggccaatatttgagtggagcaaagtcaattgctattccg
acgcaaagaaccccctttgatgcgaagaaggtggtcgaactctccggggcttgcggtaat
aatctcaaagatgtggctctgactattccggttggactgttgacctgtgtcactggggta
tcggggtcaggtaaatcgaccttaatcaatgacacgttttataaaattgcccatatcgag
cttaacggtgccagtgctgaagaaccggcgccttataaaaagatcaaaggacttgaacta
ctcgataaagtcattgatatcgaccaaagtccgattggccggacaccgcgttctaatcct
gcgacatataccggtatttttacaccgattcgtgagttatttgccggtacacaagagtct
cgctcccgggggtataaaccgggtcggttcagttttaatgttcgtggtgggcgttgtgaa
gcgtgccagggcgacggggttattaaagtggaaatgcacttcttgccagatgtttatgtg
ccatgtgatatctgtaaggggaaacgctataaccgagagacactggaagttaaatataaa
ggcaagaccattgatgaagtgctggaaatgacggtagaagatgcgagaactttctttgac
cctgtccctgcgattgccagaaaattacagacattgatggatgtcgggctgtcttacatt
cgtttaggtcaggcagcgacgacactttccggcggtgaagctcagcgagttaaactgtcc
agagagctttctaaacgagatacgggaaaaaccttgtatattcttgatgagccaacaacc
gggttgcattttcacgatattcagcaactgctgacggtgcttcaccgcctgagagaccat
ggtaatacggtcgtggtgattgagcataacctggatgttattaaaacggctgactggatt
gttgatctgggacctgaaggcgggcaaggcggcggagaaattattgcgcaggggacaccg
gaggatgtgtctaaagtggctggttctcataccgcacgttttttgaaacctatgttagaa
taa
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