Vibrio ruber: RND59_08685
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Entry
RND59_08685 CDS
T09542
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
vru
Vibrio ruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
Motif
Other DBs
NCBI-ProteinID:
WNJ94246
LinkDB
All DBs
Position
1:1898847..1903631
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AA seq
1594 aa
AA seq
DB search
MSENKKADLLSSAEAAAQNFSTDNIIKDGGCVECGCEVFIRYHYDDGKPVPEADFVLTNS
KKEISGKTDKQGMCKIENMDCGGFELLLGEGSDEFEPQDVAENNPVIQANPEYAAKAGEY
FALYTLLSREGYLTYDESGSSDSFVDVDRKWFTWVDSDYKEAYDRFWELDKEINHGPKEL
RQAVNKIHHSLAGEMAGMAQDNTAILLFCEIALGFVPVVGQAMDLYDLGCWGWDTCTKND
LDFWHWATGALVVIGFVPGLGDATKKTGKTIIDALKKSDSRVIQQAMKMLRSLSNGNLVK
YLKKFGGLLSEYANKAKKLLNDIIDGLTKAIKNSKSWAVKLLSNSFEMLVDAMKSLEKKI
DEMVGKITAKVDEFIGKVVTRKTGTPHHKGANKVDNINAEQASIHGDKPGGTHGKDPTEV
EKQKKTGGCGKEGEPIDLYTGKVFEERQDFVLAGILPLAHQRYYHSAGLKETGLMGSLWR
SSWDISLTIEGMFATFTDTDYTQGIFALPEPDEATTSLLKPQWRLCRGEQAELLLRHKDG
LTYHFGHAIGTILRLSQMSDAYGNTIRFAYERRTLKWVILSDERLIEVKTERNRMTQLTL
CEANRTPLRELARYNYDKSGRLLSVRGESGRNFDYQYSKEGYLTRWQDLAHTWVEHDYDE
QGRAIASRCADGLWTDQIRYDDDNHVHYYKSAFGGIKAYHLDERNRPYAIVDAAGNRIEQ
QWQDDLLIGETNALGETTAYSYDAWGNITTATLPDGTVHSYGYNEQGWLTSYTDPLGASW
LYEHNSQGDVIQVTDPEGRVWQMSYTERGLRDSLTEPDGSVTRYHYNERGLLTRLEPAAG
YGMDFHYDRFDRLVKRVSDKRDSQGNLTRRWHYHQSNPFPEKVIYEDGSEAHFSYDIEGN
LTAVTDALGQTQHFTYGAFDKLKTVTDPLGATTRYHYNAEAEFAGVTNSHGQQWLYGFDK
LGRIESERHYDGRTEIYGYDAVGRLVQRSKPDGHTLRYQYDVCGRLLQSESFDNQDNPTG
KSWYEYDAASRLTYAENGDAWIALAYSPSGQLVNENINGTELTHQYDAAGRRVQSSGTES
ERSYQWQQQQLSALAVGCHNPLTFAYHPGGEEKQRSNGSGFDLRHEWSATGLLTGQQLGN
QSLRKYRYDVLDRLTGIEDSHRGSAEITLNPNSQITAVRQRKSWETKAGFVHLFGYDSEL
NLNEEGFGSEYGDNVVSLADERIKRQKRDYDKAGRVTEVGRFKYRYDECGRVIEKSESKD
GFRPQSTRFIWNDEDRLTHIELSDGRRYRYRYDPFGRRIAKECLQTQQQTHYLWDGSTLV
QQSQITADGTALTSTEYLYEPGSHRPMAQVTTRHDSNRKDLHYIVTDHAGTPQELVSEAG
EIEWRGEQALWGKYQQQQFNLKIQRGYLEDAANEALSCDLRYQGQIEDKESGLYYNLNRY
YDADSGQYLSPDPIGFAGGLRPQGYVHNPMEWVDPLGLTGDPANATHITYQGIKDGKPYV
GYASKPGLGHSAEDVLKYRYGNDFSKFDVKPEPFYRGDGLEGKYTARGLEQRRFEQLGGL
DKTSNLQNPVGPNNPRRDEYLKKADNHLDSKGCS
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaataaaaaagccgatttgctctccagcgcagaggcagctgcacagaatttt
tcgaccgataacattatcaaggacggcggatgtgttgagtgtggctgtgaagtgtttatc
cgctatcactatgacgatggtaagccggtaccggaagccgactttgtcctgacaaacagc
aaaaaagaaatttcgggcaaaactgataaacaaggcatgtgtaaaatcgagaacatggat
tgtggcgggtttgagcttctgctgggcgaaggtagtgatgaatttgagccgcaagatgtg
gcagaaaacaatccggtaattcaggccaatcctgaatatgcggccaaagccggtgaatat
tttgccctgtataccctgctgagtcgggagggatatctcacttacgatgaatccggtagc
tccgacagttttgttgatgttgatcgcaaatggttcacttgggtagacagtgactacaaa
gaagcctatgaccgcttctgggagctggataaagagattaatcacgggcctaaagaactg
agacaggcggttaataaaatccaccatagtctggccggagaaatggccggcatggcgcag
gacaatacggccattttgctgttttgtgaaatcgcgctcgggtttgtgccggtggtcggg
caggcaatggacttgtatgacttaggctgctggggatgggatacctgtaccaagaatgat
ttagatttttggcactgggcaaccggtgctttggtggtgattggttttgtgccggggctg
ggggatgcgaccaagaaaaccggcaaaactatcattgatgcactgaaaaaatcggattca
cgagtcattcaacaggcgatgaaaatgctgcgcagcttgtcgaacggcaatctggttaag
tatctgaaaaagttcggtggcttactgtctgagtatgccaataaagccaaaaaattactc
aatgacattattgacgggctgaccaaggcgattaagaacagcaaaagctgggcggtcaaa
ctactgagtaactcgtttgaaatgctggtcgatgcgatgaagtcgctggaaaagaaaatc
gacgagatggtcggcaaaattactgccaaggtcgatgagtttatcggcaaagtggtgacc
cgcaaaacaggtacaccacatcacaaaggggcgaacaaagtcgataatatcaatgctgag
caagcttcaattcatggtgataaaccgggtggcactcatgggaaggatccgactgaagta
gaaaagcagaaaaaaaccggtggttgcggaaaagaaggcgaaccgatagatctatacact
gggaaggtgtttgaagagaggcaagattttgtattagctgggattctgcctttagcgcac
caacgttactatcactcggctggtttgaaagaaaccgggttgatgggcagtttgtggcgc
agcagttgggatatttcgctgaccatcgaggggatgttcgccacctttaccgacaccgac
tatacccaaggtatattcgcgcttcccgagccggatgaagcaaccacttctttactcaaa
ccccagtggcgattatgtcggggagagcaggcggaattacttctccggcataaagatggg
ctgacttatcattttggtcatgcgattgggacaatcttgcgtttgtcccaaatgtctgat
gcttacggcaataccattcggtttgcttatgagcgtcgcacgctcaaatgggtcatcctc
agtgatgaacggctgattgaggtcaaaaccgagcgtaaccgtatgacacaactgaccctg
tgcgaagctaatcggacaccgctgcgtgagttggctcgctataactacgacaaatccggc
aggctactttcggtgcggggagaatctggtcgtaatttcgattatcagtacagtaaagag
ggttacctgacccgctggcaggatttggcccacacgtgggttgaacacgattatgatgaa
caaggccgggcgattgccagccgttgtgctgacgggttgtggactgaccaaatccgctat
gacgatgacaaccatgttcattactacaagagtgctttcggtgggatcaaagcctatcat
ctggatgagcgtaaccgtccctatgcgattgttgatgctgccggtaaccggatcgagcag
cagtggcaggacgacttactgattggcgaaaccaatgcactgggagaaacgacagcctac
agctatgatgcatgggggaatatcaccacagcaactttgccggatggtaccgtacacagc
tatggttacaacgaacagggctggctgacaagttacactgacccactcggtgccagttgg
ttgtacgagcacaactctcagggggacgtgattcaagtcaccgatccggaaggccgggtc
tggcagatgagctacaccgagcgcggcttgcgtgattccttgacggagccggacggcagt
gtcacacgctatcactacaatgaacgtggcctgttgacccggctggagcctgccgcaggt
tacgggatggatttccactatgaccggtttgaccgcttggtgaaacgggtcagtgataaa
cgcgattcgcagggcaatctcacccgccgctggcattatcatcagtccaatccgtttcct
gaaaaagtcatctacgaagacggcagtgaagcgcacttcagttacgatattgaagggaat
ctcaccgcggtcaccgatgcgctcggtcagacgcagcactttacttatggtgctttcgat
aaactcaaaactgtcaccgacccgttgggggcaacgacccgctatcactacaatgctgaa
gccgaatttgccggggtgacgaacagccacggccagcagtggctgtacggtttcgacaag
ctgggacggattgaaagcgaacgtcattacgacgggcgcactgagatttatggctatgat
gctgttggccgattagtgcagcgcagcaaaccagatggtcacactttacgctatcagtac
gatgtgtgcggacgattgttgcagagcgaaagcttcgataatcaggacaacccgaccggc
aaaagctggtatgaatatgatgccgcctcgcggctgacctacgcagaaaacggtgatgcg
tggattgcactggcctacagcccgtccgggcaactagtcaatgaaaatatcaacggcacc
gaactgacccaccagtacgatgccgccggacggcgggttcagtcatcgggaacggagagt
gagcgcagttatcagtggcaacagcaacagttgtccgcacttgctgtcggctgtcataat
ccgctgacttttgcctaccatccgggcggggaagagaaacagcgcagtaacggcagcggt
ttcgacctgcgccatgagtggagtgcgacgggcttattgaccgggcagcaactcggcaat
caatcgctacgcaagtaccgctacgatgtactggaccggctgaccgggatagaagacagt
catcgcggcagtgcggaaatcactctcaacccgaacagtcagattactgcggtgcggcag
cgtaaatcatgggagaccaaagcagggttcgttcatctgttcgggtatgacagcgagctg
aacctcaatgaagaaggcttcggcagtgaatacggtgacaatgtggtgtcgctggccgac
gagcggataaaacgccagaaacgcgactatgataaagccgggcgagtgactgaagtcggc
cgcttcaaatatcgttacgacgaatgtggccgggtcatcgagaaaagcgaatcgaaagac
ggcttccgcccgcagagcacaagatttatctggaatgacgaagaccgcctgacccatatc
gaactgtcggacgggcgacgttaccgctatcgttatgacccgttcggacgacggattgct
aaagaatgcctgcaaacccagcagcagacccattatctgtgggacggcagcacgctggtg
cagcagagccaaatcaccgccgacggcacagcactgaccagcaccgaatatctgtacgag
ccgggcagccaccgcccgatggcgcaggttaccactcggcacgatagtaatcgtaaagac
ctgcactatatcgtcaccgaccatgccggcacaccgcaagagttggtgagcgaggccggg
gaaatcgaatggcgcggtgaacaggcactgtggggtaaataccagcagcaacagtttaac
ctcaaaattcaacggggttatctggaagatgcggccaacgaagcgctgagctgcgatctg
cgttatcagggacagatcgaagataaagaaagtgggctttactacaatcttaatcgctac
tacgatgcagacagtggccagtatctcagccccgacccgatcggatttgcggggggattg
aggcctcagggttatgtgcataacccgatggaatgggtcgatccgctggggttgacggga
gatcctgcaaacgctactcatataacttatcaagggatcaaagatggaaagccttatgtt
ggatatgctagtaaacccggattgggacatagcgctgaagatgtattgaaatatcgttat
ggaaatgattttagtaagtttgatgttaagcctgagcctttttatcgaggagatggttta
gaaggtaaatatacagcccgagggttagaacagagaaggtttgaacaactaggtggttta
gataaaacatcaaacctccaaaatcctgtgggtcctaataatccaagacgagatgagtat
ttgaaaaaagcagataatcatttagatagtaaaggttgtagttaa
DBGET
integrated database retrieval system
