Vibrio ruber: RND59_09185
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Entry
RND59_09185 CDS
T09542
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vru
Vibrio ruber
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vru03016
]
RND59_09185 (truD)
Enzymes [BR:
vru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RND59_09185 (truD)
Transfer RNA biogenesis [BR:
vru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RND59_09185 (truD)
Prokaryotic type
RND59_09185 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
TAGT
Motif
Other DBs
NCBI-ProteinID:
WNJ94341
LinkDB
All DBs
Position
1:2013878..2014924
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AA seq
348 aa
AA seq
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MDDVLANLAYLYGKPTAKAKIKAKPEHFIVTEELGFPLDGVGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGDTPDFADFLTRYPHIKILETTRH
LRKLRPGDLRGNHFQITLTEVSDMTDVEQRLNRIGKQAVPNYFGAQRFGHQGNNVNEARR
WGRENVRTRNQNQRSLYLSAARSWIFNQIVSERISKGCFHHLIDGDIVLQGNEQFRVEGD
EMLAQWQEHVTQCHADISAALAGDNALPTSHEALALEQRFVDDELDLMKLIRGNRMKHER
RNIALKPRQLDWKLGKNEVILSFALDAGCFATSLIRELIEEVPVKREF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgttttagccaatttggcctatttgtacgggaaacccactgcaaaagctaaa
attaaagcaaaaccagaacactttattgttacggaagaacttgggtttccattggatggt
gttggtgaacacctgatggttcgtattcgtaagaccggagaaaataccagttttgtcgcc
aatgagttagccaaggcatgtggtgtgaagtcgaaagacgtaagctgggcgggtttaaaa
gatcgtcatgcggtcaccgagcaatggttgagtgttcacttaccgaaaggggacacgcca
gactttgctgattttctgacgcggtaccctcatattaagattcttgaaaccactcgccac
ctgcgtaaattaaggccgggtgatctccggggcaatcattttcagattacattaactgaa
gtgtcggatatgacggatgtcgagcaacggttgaataggattggcaaacaagctgtgccg
aactattttggtgcacaacgtttcggtcatcagggcaataacgtgaatgaagcccgacgc
tggggccgggagaatgtccggactcgtaatcagaatcagcgcagtctttacctttctgcc
gcgcgttcttggatctttaaccaaatcgtctcagaacgaatttcaaaaggctgttttcac
catttgattgatggtgacatcgtactgcaagggaatgaacagttccgggttgaaggggac
gagatgctggcgcagtggcaagagcatgtgactcagtgtcatgccgatatttcagccgca
ctggccggagataatgccctaccgaccagtcacgaggcgcttgctctagagcagcggttt
gttgatgatgagctggacttaatgaaattgattcggggtaaccgaatgaagcatgaaagg
cggaatattgctctcaaacctcggcaactggattggaagctgggaaaaaatgaggttata
ttgagttttgcgcttgatgcgggatgctttgccacttctttaatccgagaattaatcgaa
gaagtacctgtgaaaagggagttctaa
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