Vibrio ruber: RND59_09240
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Entry
RND59_09240 CDS
T09542
Name
(GenBank) exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
vru
Vibrio ruber
Pathway
vru00040
Pentose and glucuronate interconversions
vru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RND59_09240
Enzymes [BR:
vru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
RND59_09240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
WNJ94352
LinkDB
All DBs
Position
1:complement(2029907..2032135)
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AA seq
742 aa
AA seq
DB search
MKRYRTTLLMTSVLSLSACSQYSSLPAPQDLTWQAITFGQSTDLNFASTILPEKIGLNAV
TFNGQSVQPGPLLNTFTIESRGGKLANSHEGVTFYYTELPANANFTLSATVVLNQLGPET
GSTPNRQEGAGIMVRDILGSARLDPQPPGAEEFPAASNMVMHVLRANKKKNNGLINVNAI
YREGVYQPWGTKGNHIVRDEFIKSVPYGNDIAYQMSLSRTDAGYTATYHYGDISETHPIK
GANTNIIAMQDPKHQYVGFFASRNAKVTISNAHLTVHSGTLTKAPAYHPQPEPLVLQPAS
PNQSATADYLFQSRASDTGTFTLYQDKQLLIKDQKVAAGQLFSAATHLKNPTTLFSLHFT
PTEGADRSARQYQQTVTRVALKDPMHLRVNPTGSHGRLTLKDAMRLLPPGGTITLEDGEY
GALLIPLTASGHKNQLKTLKAGGDHVRFTGDITHQANYWHISHLEVAGARYIVHGSHNTF
DRIITHDASDTGFQITSPAKSPRAFWASHNLVQDSQSYNNMDPSRINADGFAAKMRIGDG
NTFIRCISHHNIDDGWDLFNKVEDGPNGVVTIIDSISYKNGQTLQVKARGGSRGNGFKLG
GEGLPVAHIIKNNLAYQNNMDGFTDNFNPGRLILENNVAIDNKRFNFLIRKSPYTDTQKQ
GIFTDNSSYRFYSASPYNDVVNAEIRRNNTLIVDGQSTNAQGAHPTAETLSKLKQAAKIS
SQAAVPGQTAVKNIRTWFNQSP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtacagaacgacactactcatgacgtcggttttgtctttatctgcctgttca
cagtatagttcgctccccgcacctcaggatttaacgtggcaggcgataaccttcggtcag
tcaaccgatctaaattttgcatcgacaattttgccggagaaaatcgggctcaatgcagtc
accttcaatgggcaatccgtgcagcccgggccgcttctcaacacatttacgatagaaagt
cgtggcggcaaactggcgaactcacatgaaggcgtgacattttactacacagaacttcct
gccaatgcgaatttcactttatcagcaaccgtggtactcaaccagcttggtccagaaacc
ggctcgaccccgaatcgtcaggaaggtgcgggaatcatggttcgtgatattcttggctct
gcgcgtttagatccccagcctcccggtgcagaagagttccctgcggcatccaatatggtg
atgcatgtattgcgcgccaacaaaaagaaaaataacgggctgatcaatgtcaatgccatc
taccgcgaaggggtttatcagccttggggaaccaaaggtaatcacatcgtccgggatgaa
ttcatcaaaagcgtcccttatggcaatgatatcgcctaccagatgtcactcagccggaca
gatgcaggctataccgcgacctatcattatggcgatatcagcgagacccatcccatcaaa
ggcgcgaataccaatatcatcgccatgcaggatccaaaacaccaatatgtgggtttcttt
gcctcgcgtaatgccaaagtcaccatcagcaatgcacatctgaccgtccattcgggtacg
ctaaccaaagcaccggcctatcatcctcaacctgaaccactggtgctacaacctgcatcc
cccaatcagtctgctacagcagattacctgtttcagtctcgtgccagtgataccggcacc
tttactctctatcaagataagcaattactgatcaaagaccaaaaagtggcagcaggccaa
ctcttcagtgctgcaacacatttaaaaaatccaacaacgctcttttcgctccactttaca
ccgacagaaggcgctgaccgttctgccaggcaatatcagcagactgtcacccgtgtagcg
ctcaaagatccaatgcatttacgtgtcaatcctactggtagtcatggtcggcttaccctc
aaagatgcgatgcgacttctccctccgggtggaaccatcacactggaagatggtgaatat
ggtgcgctactcataccactgaccgccagtggacacaaaaaccagctcaaaaccctgaaa
gccggaggggatcatgttcgttttaccggggatattacccatcaggcaaactactggcat
atctctcaccttgaagtcgcgggcgctcgctatattgtccacggcagccacaatacattt
gaccgcattattacccatgacgcctcagatacgggctttcaaattacctcaccggcaaaa
tctcctcgcgcattttgggcgagccataacctagtgcaagatagtcaaagctataacaat
atggatccttcccggatcaatgccgatggatttgctgccaagatgcgcatcggagatggc
aatacctttatccgttgtatctctcatcacaacatcgatgatggctgggatctgttcaat
aaagtcgaagacggccccaatggtgtcgtgaccattatcgattcgatctcttataaaaat
ggccagacactgcaggtcaaagccagaggcggcagccggggaaatggattcaaacttggc
ggagaaggactaccggtcgcacatatcattaagaataatcttgcttatcaaaataatatg
gatggctttaccgataattttaatccgggccgtttgatccttgaaaacaatgttgcgatt
gataacaagcgttttaacttcctgatcagaaaaagcccttacactgacactcagaaacaa
ggcatattcaccgacaacagctcttatcgcttctattctgccagtccgtacaatgatgtc
gtgaatgcagaaatacgtcgaaataatacgctgattgtcgatggtcaatccaccaacgct
cagggagcacatcccactgccgagacgttatccaagctaaaacaggctgccaaaatttca
tctcaggcagcagttcccggtcaaacggccgtaaaaaacatccggacatggttcaatcag
tccccctga
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