KEGG   Vibrio ruber: RND59_13040
Entry
RND59_13040       CDS       T09542                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vru  Vibrio ruber
Pathway
vru00260  Glycine, serine and threonine metabolism
vru00460  Cyanoamino acid metabolism
vru00630  Glyoxylate and dicarboxylate metabolism
vru00670  One carbon pool by folate
vru00680  Methane metabolism
vru01100  Metabolic pathways
vru01110  Biosynthesis of secondary metabolites
vru01120  Microbial metabolism in diverse environments
vru01200  Carbon metabolism
vru01230  Biosynthesis of amino acids
vru01240  Biosynthesis of cofactors
vru04981  Folate transport and metabolism
Module
vru_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RND59_13040 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    RND59_13040 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RND59_13040 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RND59_13040 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RND59_13040 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    RND59_13040 (glyA)
Enzymes [BR:vru01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RND59_13040 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1
Other DBs
NCBI-ProteinID: WNJ95046
LinkDB
Position
1:2875418..2876683
AA seq 421 aa
MFTKNDSIAGFDDAVWAAMQLEAKRQEEHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
AKRYYGGCEYVDQVESLAIERACRLFCADYANVQPHSGSQANAAVYMALCNPGDTILGMS
LDHGGHLTHGAKVSFSGKIYNAVQYGLNPETGEIDYDQVERLAKEHHPKMIVAGFSAYSR
KVDWARFREIADMVDAYLFVDMAHVAGLVAAKLYPNPVPWADVVTTTTHKTLRGPRGGLI
LAQSNPELEKKLNSAVFPGGQGGPLMHVIAAKAVAFQEALQPEFRDYQQQVILNAQVMAE
VLSSRGFDIVSDGTDNHLFLLSLIKQGLTGKAADAALGKANITVNKNAVPNDPQSPFVTS
GLRIGSPVVTTRGFKEKECTLLAGWIADILDVLDDEAKLESTIEQVKSQVIALCAEFPVY
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttacaaagaatgattcgatagccggtttcgatgatgcggtatgggcggcaatgcag
cttgaagcaaagcgacaggaagaacacatcgagctgattgcatcagaaaactatactagt
ccgcgtgtcatggaagcgcagggctctgttctgacaaacaagtatgccgagggctatccg
gcaaaacgttattatggtggctgtgagtatgttgatcaggtggaaagcctggccatcgag
cgcgcctgccgtcttttttgtgctgattacgctaacgtgcaaccacactcgggttctcag
gcgaatgctgcggtttatatggcactgtgtaatccgggcgatacgattctgggaatgagt
cttgatcatggcggacacttaacgcatggcgctaaagtcagcttctccggaaaaatctac
aatgcggtacagtatggcctcaaccctgaaaccggtgaaatcgattatgatcaggttgag
cgtttagccaaagagcatcatccgaaaatgattgtggccggtttctcggcttattcaaga
aaagttgactgggcacgttttcgtgagattgctgatatggtcgatgcatatctgtttgtc
gatatggctcatgttgccggtctggttgcagcaaaactctatcctaaccctgtcccttgg
gctgatgttgtcaccaccacaacccacaaaacactgcgtggtccgcgtggggggctgatt
ctggcgcaaagtaatcctgaactggaaaagaaactcaactcagcggttttccccggtggt
cagggcggtccgttgatgcatgtgattgcggcgaaagccgttgcttttcaggaagctctc
cagcctgagttccgagattatcagcaacaagtcattcttaatgcgcaggtgatggctgaa
gtattgagcagccgtggattcgacatcgtctctgacggcaccgataaccatctgttcttg
ctcagcttaatcaagcagggtttaaccggtaaagcagccgatgctgcactgggcaaagct
aatattaccgtcaacaagaatgctgttcctaatgacccgcagtcaccgtttgtgacgtca
gggttgcgtatcggctctcctgtcgtcaccacccgaggatttaaagagaaagaatgtacg
ctgttggctggctggattgctgacattctcgatgtccttgatgatgaagcaaagctggag
agcaccatcgaacaagttaagtcacaggtaatcgcgctttgcgctgaattccctgtgtat
cgctga

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