KEGG   Vibrio ruber: RND59_15545
Entry
RND59_15545       CDS       T09542                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vru  Vibrio ruber
Pathway
vru02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RND59_15545
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vru02022]
    RND59_15545
Two-component system [BR:vru02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   RND59_15545
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA AAA_2 Mg_chelatase AAA_16 AAA_22 AAA_7 AAA_3 FleQ DUF6716 HTH_50
Other DBs
NCBI-ProteinID: WNJ95511
LinkDB
Position
1:3460866..3462209
AA seq 447 aa
MCDVFFIDDEADIRIAIEQSFELADIQARFFDSAEEALLAIKQDGLPLVIVTDIQLPGLS
GQNLLHSAHHQDPDLPVILITGHGDISMAVQAMHDGAYDFIEKPFAPERLMETVHRAIEK
RRLTLENQKLKRSLKASQTLGPRIIGETVSIQSLKDTISQIADTNADILLFGETGTGKEL
IARSLHELSSRRERNFVAVNCGAVPENLIESELYGHEKGAFTGAESQRIGKFEHAQGGTL
FLDEIESMPMSAQIRLLRVLQERLIERVGSNELIPLDIRVIAATKVDLKQAAQQGTFRED
LYYRLNIVTLDIPPLRERKEDIPALFHHFLLVAAARYGKAANSISKQDMQSLMSHNWPGN
VRELRNAAERYVLLGKLIQLGQETHLMNGPVISLADQVAEFEKSVIEQALIESGGSIKDT
MESLNLPRKTLYDKMQKYQLDKENYKN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtgcgatgtattttttatcgatgatgaagcggatattcgtattgcgatcgaacagagc
tttgaactggcagatatccaagccagattttttgacagtgccgaagaagcgctgctggca
atcaaacaagacggactaccgctggtgattgtcacagatattcaattgcccggactcagc
ggccaaaatttattgcattctgcccaccatcaagatccagatttaccggtcatcctgatt
accgggcacggtgacatttcgatggcagttcaggcgatgcatgacggtgcctatgacttt
atcgagaagccctttgcgcccgagcggctgatggaaacggttcaccgggcaatcgagaag
cgtcggctgacactggaaaaccaaaagctgaagagaagtttgaaggccagccagaccctc
gggccacgaattattggggaaaccgtcagtattcaatccttgaaagacaccattagccag
attgccgataccaatgctgatattctgctttttggtgagaccggcaccggcaaggagttg
attgcccgttctctgcatgaattgagttcacgcagagagcgtaatttcgtggccgtcaat
tgtggtgctgtcccggaaaacttgatcgaaagtgaattatacggacacgagaaaggtgca
tttaccggtgccgagagtcagcgtatcggtaaattcgaacatgcacagggcggaacgctg
tttcttgatgaaatcgaatcaatgccgatgtcagcacaaattcgcctccttcgggtgtta
caagaacgattgattgagcgcgtcggttccaatgagctaattccgttggacattcgggtc
attgctgctaccaaagtcgatctcaaacaagcagcacaacaaggaacatttcgggaagat
ttgtattatcggctcaatattgtcacgctggatattcccccgctacgggaacgtaaagaa
gatattcccgccttattccatcactttttgctggttgccgcagcccgctatggcaaagct
gccaattcgatctcaaagcaagacatgcaatcattaatgagtcataactggccgggtaat
gtccgcgagttaagaaatgccgcagaacggtatgttttgctcggtaaactgattcagctg
ggtcaggaaacgcacctgatgaacgggccggtaatcagtttagccgatcaggttgccgag
tttgagaagtcagtgatcgaacaggcattaatcgaatccgggggaagtattaaagacacc
atggaaagtctgaatctgccacggaaaacactttacgataaaatgcaaaaatatcagctg
gataaagaaaactataaaaactaa

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