Vibrio ruber: RND59_16620
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Entry
RND59_16620 CDS
T09542
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vru
Vibrio ruber
Pathway
vru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_16620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vru02000
]
RND59_16620
Transporters [BR:
vru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RND59_16620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WNJ97750
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All DBs
Position
2:188780..190564
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AA seq
594 aa
AA seq
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MSRLRLRPLAVALAASLIYVSTPTFADTTSAAPKVLRFSEDGTPTNFDSVQSGTTYSNTI
VTAVYDTLYEYKYLKNPYELKPNLATAMPEVSDDGLTYTIHIKQGVHFVDDPAFPDGKGR
EVTADDFIYSMKRHFDPANRSQGAWLWTNKIAGIEAWKEAGADYSKPLEGLSAPDKYTIK
IKLEQPYPQLVYTLAMGYSALVPHEAVEKYGREFATHPVGSGPFKLISHNSTKTVLERNP
NYRHEVFHLAEAGYDPKVHGETGIAALDGKTLPRVDRVEVNWVKQQSARWNSFSKGNEIV
NTTLQNEQLDTVLASKHPVTLKPEYAAKYNFRAQREAGMVYNVFNFDDEYLGHSDDPKTN
AQNKALRCAIIKSFDWPQRVSRFYLGLGEAYPGFIVPGTDAFDPNLDKSSIAQDIAGAKK
LLKENGWNARNLPVLYYPATSTVRYKQFFEQFRGNLMKIGYPKNKIKFKPYATFGDFNRD
IKNSRTQMVPMGWGLDYPDAENTLQLFYGPNRSPGSNSANYNNPQYNALFEKAAVMQPGP
ERTAIYHQLNQILIDDCVGIGSFSRTRVRLWHKDVTMWPQREILGNYLKYIDIQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgattgagattacgcccgctggctgtagcgcttgcggcttcacttatttatgtc
agcacaccgacatttgcagataccacctcagcagcccccaaagtgttacgcttttctgaa
gacggtactccgacaaactttgattcagttcagtccgggacgacctacagcaataccatt
gtcaccgcggtatacgacaccttgtacgaatataaatatttgaagaacccgtatgaatta
aaacctaatctcgcgaccgcaatgcccgaggtctccgatgatgggctgacatataccatt
catatcaagcagggcgttcattttgtcgatgatccggcatttcccgatggcaaaggcaga
gaagtcacggctgacgattttatctattcaatgaagcgtcactttgatccggccaaccgc
tcacaaggcgcttggttatggacgaataaaattgcgggtatagaagcatggaaagaagcc
ggtgcggattatagtaaaccgcttgaaggtctgagtgccccggataagtacacaattaaa
atcaagctggaacagccctatccgcaactggtttatactttggcaatgggttattccgcg
ctcgtcccgcatgaagccgtcgaaaagtatggccgtgaatttgccacccatccggtcggc
agcggcccgttcaaactgatttcacacaattcgactaaaaccgtactggagagaaatcca
aactaccgccatgaagtattccatcttgccgaagcaggttacgatccgaaagttcacggc
gaaacgggcattgcagcgctggacgggaaaacactcccacgagttgatcgcgtcgaagtc
aactgggtcaaacaacagtctgcacggtggaattcattcagcaaaggcaatgaaatcgtc
aataccactttgcaaaatgaacagctcgataccgtgttggcatctaaacatccggttaca
ctcaaaccggaatatgccgcaaaatataactttcgtgctcaacgtgaagccggcatggtg
tataacgtcttcaactttgatgatgaatatttgggtcactcggatgatccgaaaaccaat
gcacagaataaagcgctgcggtgtgccatcatcaagtcgtttgactggccgcagcgtgtt
tcacgcttttatttagggctcggtgaagcgtatccgggtttcattgttcccggaaccgat
gcgtttgatccgaatctggacaaaagttctattgcgcaggatattgccggggcgaagaaa
ctgctgaaagaaaacggctggaacgcgcgtaatttaccggttctttactatccggcaacc
tccaccgttcgctataaacagttcttcgaacagttccggggcaatttgatgaaaatcggc
tatccgaagaataagatcaaatttaagccctatgctaccttcggtgacttcaaccgggat
atcaagaacagccgcactcagatggttccgatgggttgggggctggactatcccgatgca
gaaaacaccctgcaactcttctacggaccaaaccgctctcccggttcgaacagtgcaaac
tacaataacccgcaatacaacgcgttatttgagaaagcggcggtcatgcaaccggggcca
gaacggacggctatctaccatcagctcaaccaaatcttaatcgatgactgtgtgggcatc
ggcagcttctcccgtacccgggttcgtctatggcacaaagatgtcacgatgtggccacaa
cgggaaatcctcggtaactacctcaaatatattgatattcagtag
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