Vibrio ruber: RND59_17730
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Entry
RND59_17730 CDS
T09542
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vru
Vibrio ruber
Pathway
vru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RND59_17730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vru02000
]
RND59_17730
02044 Secretion system [BR:
vru02044
]
RND59_17730
Transporters [BR:
vru02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RND59_17730
Secretion system [BR:
vru02044
]
Type I secretion system
Adhesin protein transporter
RND59_17730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WNJ97957
LinkDB
All DBs
Position
2:complement(434425..436536)
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AA seq
703 aa
AA seq
DB search
MQDTLLNSLIYISRYYGLANSPEALINGLPLADGKLTPFLLPRAAERAGLVAKENRATLT
DIPRLIFPVILLLKGGESCVLLSIHEDQQEAEVVTESSGMVPISYSIQELEQRYIGRYFM
VKKQFSYDERSPEVLKTNQGHWFWSTIWQSKNIYRDVLIASLLINAFAIAAPMFSRLVYD
KVVPNLAFETLWVLSSGIVCIFLFDITLKLLRSYFIDVAGKKSDILISSKLYSKVLGIRM
ENRPPSVGAFARHLQEFESIREFFTSATISSLIDLPFAFLFLFLIWLMSGPLVIVPIIGV
VILACYSYLIQAKLKVAIEEGSRLASQKYANLIESLAGLETVKLFGAQSQFQYRWEEAVA
HMANWNIKSRKITNGIQNAAGFVQQVSNIGMIIVGVYLISEGDLTMGGMIAATMLSSRAI
APMIQLSLLSTRYTQAKSAFTLIEDIMSMPDEQEEGKRYIHRPIFKGKIELDNVTFHYPG
SANASIRDVSITINPGEKVAIIGRVGSGKTTLERLIMGLYKPTEGHIRIDDTNISQLHHI
DIRRNIGCVPQDSLLFYGTIRENITLGRPLVDDRDVIDAANRAGVTMFTQQDAAGMERQV
GEGGQLLSGGQKQAVAIARALLGRPPVLLMDEPTSAMDNRSEMHVKHQFKQLSSNETLIL
ITHKTSMLDIVDRIIVMEKGYVIADGAKEEVLNNLRQGNVRAV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacattactcaattcgctgatttatatcagtcggtattatggcttagccaac
tcaccagaagcactgattaacggattaccgttagcagatggaaagctcactccatttttg
ctgccacgggctgcagaaagagctgggttagttgccaaagaaaaccgcgcaacattgacc
gatattccccgactgatatttccggtcatactgttacttaaaggcggtgagtcatgtgta
ttactcagtattcatgaagatcaacaagaagctgaagtcgtcacagagtcatccggtatg
gtgccgatatcctactctattcaggagctggaacagcgctacatcggccgctattttatg
gttaaaaagcagtttagctatgatgagcgctctccggaggttttaaaaacaaaccaagga
cactggttctggagtaccatttggcaatcaaaaaatatttaccgtgatgtcctgattgct
tcattgctgatcaatgcctttgccattgcggcaccaatgttttcccggttagtgtatgac
aaagtcgtcccgaaccttgcatttgaaacactctgggtgctttccagcggtatcgtctgt
atttttctgtttgatatcaccttaaaactgctcagaagttatttcattgatgtcgcaggc
aaaaaatcagatatcctgatctcatccaagctttacagtaaggtactgggcatccggatg
gagaatcgccccccttctgtcggtgcatttgccagacacctgcaagaattcgaatcgatt
cgggaattttttacctcagcgacaatttcatcactgattgatttaccatttgcattctta
tttctatttctcatttggttaatgtcaggccctctggtcatcgtaccgattatcggtgtg
gtgatactggcatgttactcttatctgattcaggcaaaactgaaagttgccattgaagaa
ggctccaggctcgcttctcagaaatatgccaacttgattgaaagccttgccggtttagaa
acggtcaaactattcggtgcacaaagtcaattccaataccgctgggaagaggccgtcgca
cacatggcgaactggaatattaaaagcagaaaaataaccaatggtattcaaaacgctgcg
ggatttgtccaacaagtcagtaacatcgggatgattattgttggtgtttatttaatttct
gaaggtgacttaaccatggggggcatgattgcagccacaatgctcagcagcagggcaatc
gcaccgatgattcagctctccttactttctactcgatatactcaggcaaaatcagcattc
accttgatcgaagacatcatgtctatgccagatgaacaagaggaaggcaaacgctatatt
catcgaccaatttttaaaggaaaaatcgagttagataatgtgacttttcactatccgggc
tcagctaacgcatcgattcgggatgtcagtatcactatcaaccccggagaaaaagttgca
attattggcagagtgggctcagggaaaaccacattagaacgcttaatcatgggattatat
aaacccacagaagggcatatccgtattgatgacaccaatatctcccaactacaccacatt
gatattcgtagaaatattggctgtgtaccacaagacagcctgctattttacggaacaatt
cgagaaaacattacgctcggaagaccattggttgatgaccgggatgttattgatgcagca
aaccgcgccggtgtaacgatgtttactcaacaggatgcggcaggcatggagcgccaagtc
ggtgaaggcggacaattactttccggcggacagaaacaggcggttgcgattgccagagca
ctgctaggccgccctccggtgctattaatggatgaacccaccagtgcaatggacaaccgc
tcagaaatgcatgtgaagcatcaatttaagcaactctcttcgaacgagactctgatactc
atcacgcataaaacatcaatgctggatattgttgatcgaattatcgtgatggaaaaagga
tatgtgattgcagatggtgccaaagaagaagtgctaaacaatttgcggcagggaaatgtc
cgagccgtttag
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