Aliivibrio salmonicida: VSAL_I0002
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Entry
VSAL_I0002 CDS
T00782
Symbol
trmE
Name
(GenBank) probable tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsa03016
]
VSAL_I0002 (trmE)
Transfer RNA biogenesis [BR:
vsa03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VSAL_I0002 (trmE)
Prokaryotic type
Methyltransferases
VSAL_I0002 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
ABC_tran
Ras
SRPRB
Arf
Roc
Gtr1_RagA
AAA_29
AAA_28
GxGYxYP_N
Motif
Other DBs
NCBI-ProteinID:
CAQ77687
UniProt:
B6EP39
LinkDB
All DBs
Position
1:complement(811..2178)
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AA seq
455 aa
AA seq
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MTLHTDTIVAQATAPGRGGVGIIRVSGPKAQQVALEVVGKTLKPRYAEYTPFKDDNGLEL
DQGIALYFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILKIEGIRTARPGEFSERAFLND
KMDLAQAEAIADLIDASSEEAAKSALNSLQGVFSRKINTLVESLIYLRIYVEAAIDFPEE
EIDFLADGKVSGDLQGIIDNLNAVRQEANQGAIMREGMKVVIAGRPNAGKSSLLNALSGK
DSAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIAQADRV
LFMVDGTTTDATDPKVIWPEFLDRLPKNMGMTVIRNKADQTGENLGICHVNDPTLIRLSA
KTGEGVDALRLHLKECMGFSGNQEGGFMARRRHLEALEKASEHLDIGQQQLEGYMAGEIL
AEELRIAQQHLSEITGEFSSDDLLGRIFTSFCIGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacattacatacagacaccatcgttgcacaagcaacagcccctggacgaggcggcgta
ggcatcattcgagtatcaggccctaaagctcaacaagtcgccctagaagtcgtaggaaag
acacttaagccgcgttacgctgagtacacgccatttaaagatgataatggtttagaactt
gatcaaggcatcgccctgtattttcctaatccacattcttttactggtgaagatgttcta
gagcttcaaggacatggcggtcctgtcgttatggatatgttgattaaacgcatcttaaaa
attgaagggatccgaacggctcgcccaggagagttctcagaaagagcttttttgaacgat
aaaatggatttagcccaagccgaagccattgccgatttaattgatgcaagttcagaagaa
gcagcaaaatcagcacttaattcattacaaggtgttttctctagaaaaataaacacctta
gttgaatcacttatttatctgcgtatctacgttgaagctgcgatagatttcccagaagaa
gaaatcgactttctggcggatggcaaagtgagtggtgacttacaaggcattattgataac
cttaacgcggttcgccaagaagcgaatcaaggagccattatgcgtgaaggcatgaaggta
gttattgcaggtcgcccaaacgcaggtaaatcgagtcttctgaacgcattatcaggcaaa
gacagcgctatcgttactgatatcgcaggcacaacccgtgatgtcttgagagagcatatt
cacattgatggtatgccattgcatattattgataccgcaggtcttcgagaagcgtcagat
gaagtagaacgtattggtatagaacgcgcgtggcaagaaatagcccaagcagaccgagtt
ttatttatggttgatggcacaacaacagatgcaactgaccctaaagttatctggcctgaa
tttctagatcgattgcctaagaatatgggtatgacagtcattcgaaataaagccgatcaa
accggtgaaaatcttggtatttgccacgttaacgatcctactcttattcgcttatcagca
aaaacaggtgaaggtgttgatgctttgcgattgcatttaaaagaatgcatgggtttctct
ggcaatcaagaaggtggctttatggcacgcagacgtcatctcgaagcattagaaaaagca
tctgaacaccttgatatcggtcagcaacaacttgaaggttatatggcaggagaaatcctg
gctgaagaactaagaatcgctcaacaacaccttagtgaaataaccggtgaattcagttct
gatgacttattagggcggatttttacttctttctgtattggtaaataa
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