Aliivibrio salmonicida: VSAL_I0099
Help
Entry
VSAL_I0099 CDS
T00782
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03030
DNA replication
vsa03430
Mismatch repair
vsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSAL_I0099
03430 Mismatch repair
VSAL_I0099
03440 Homologous recombination
VSAL_I0099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_I0099
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I0099
Enzymes [BR:
vsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSAL_I0099
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSAL_I0099
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSAL_I0099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
RNase_H_2
Acyltransf_C
Motif
Other DBs
NCBI-ProteinID:
CAQ77784
UniProt:
B6EP58
LinkDB
All DBs
Position
1:complement(134012..134728)
Genome browser
AA seq
238 aa
AA seq
DB search
MISNTHQEILNWTAFFTHKYEASKDQRLKNFYQTGTYEEETPLKEIEFVALDFETTGLDA
NQNSIISIGLVPFTLERIRCRESQHWFVKAQDSLEENSVVIHGITHSDLQGAPDLRRILE
KVLDALAGKVVVVHYRKIERDFFDINLRNLIGEGIVFPIVDTMQIEGDFQQEQAKGLINW
IKGKRPESIRLANSRSRYGLPAYAPHHALTDAIATAELFQAQIRYHFSENDPIRKIWQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaacactcatcaagaaattttaaactggaccgctttctttactcataaatac
gaagcaagtaaagatcagcgccttaaaaatttctaccaaacagggacttatgaagaagaa
acaccactcaaagaaattgagtttgttgctttagattttgaaaccacagggttagatgca
aaccaaaacagcatcattagtatcggattagttccgtttaccttagagcgtattcgttgt
cgtgaatcgcaacattggtttgttaaagcacaagatagcctagaagaaaactcggtcgtt
attcatggtatcactcactcagatttacaaggtgcccctgatttacgccgtattttagag
aaagtattggatgcattggcaggcaaagtggtcgtggttcattatcgtaaaatcgaacgt
gacttctttgatatcaacttacgtaatcttattggcgaaggcatcgtttttcctatcgtc
gatacgatgcaaattgaaggggactttcaacaagaacaagcgaaaggattaattaattgg
attaaaggaaagcgccctgaatccattcggttagccaatagccgctcacgctatggttta
ccagcatatgccccgcatcatgcgttaaccgatgccatagcaaccgctgaactgtttcaa
gctcaaatccgctaccatttctctgaaaatgacccgatcagaaaaatctggcaataa
DBGET
integrated database retrieval system
