Aliivibrio salmonicida: VSAL_I0162
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Entry
VSAL_I0162 CDS
T00782
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00540
Lipopolysaccharide biosynthesis
vsa01100
Metabolic pathways
Module
vsa_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VSAL_I0162 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
VSAL_I0162 (kdtA)
Enzymes [BR:
vsa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VSAL_I0162 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VSAL_I0162 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VSAL_I0162 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VSAL_I0162 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
Lipid A
VSAL_I0162 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
CAQ77847
UniProt:
B6EPB9
LinkDB
All DBs
Position
1:201889..203151
Genome browser
AA seq
420 aa
AA seq
DB search
MLIRLVYTLLLTLLSPVLLFGLYKKKPNKPQFGDRWKEHFGFTPTLKKSEQPLWIHAVSV
GEAIAATPLIKALKQQSPEQPILVTTTTSTGAEQIAKLGDLVEHRYMPIDFPFAVNGFLK
TVNPSKLLIIETELWPNTLHSVGKSNIPIYVVNARLSEKSCQGYTKIQPVFTELSKHLTK
VLCQTQADADRFARLGINKERLCATGSIKFDIQISDEIKQQGQELRQLLDNDRPIWIAAS
THKGEDEQVLDAHKEVLKEHPNALLILVPRHPERFDTVFELSKNSGFSSIRRTSNKTVTA
ETQVYLGDTMGEMLVLIGAADVCFMGGSLLGDKVGGHNVLEPAALGVPVIIGPSYYNFKE
IVDTLRGEQGIVICEPTQLSNHIVKLIDDSTEYQLLQNSASNVVQSNQGALNRTIAISNI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttaatccgactagtttataccttactattaacacttctctctcctgttttattgttt
ggtttatataagaaaaaaccaaacaaacctcaatttggtgaccgctggaaggagcacttt
ggatttactcctacgctaaaaaaaagcgaacaaccactctggattcatgcggtttcagtt
ggagaagcgattgctgcgacaccattaattaaagcattaaaacagcagagccctgaacag
ccaatcctagtgacaaccacaacaagcacgggtgcagagcagattgccaagttaggtgat
ttagttgaacaccgctatatgcctattgatttcccatttgctgtgaacggatttttaaaa
acggttaatccaagtaaattactgattattgaaacagagctgtggccaaataccttacat
tctgtcggtaaatctaacattcctatttatgtggttaacgcacgtttatctgagaagtct
tgccaaggctacaccaaaattcaacctgtttttaccgagctaagtaagcacttaacaaaa
gtactatgccaaacccaagcggatgcagatcgctttgcgcgtttaggtatcaataaagaa
agattatgtgctactggctctatcaaatttgatattcaaatctcggatgagataaaacag
caaggccaagagttacgtcagctattagacaatgaccgccctatttggattgcagctagt
actcataaaggtgaagatgaacaagttcttgatgctcataaagaagtattgaaagagcac
cctaacgccttgttaatcttggtacctcgccaccctgagcgttttgatacggtatttgaa
ttaagtaaaaactcgggatttagcagtataagacgcacctctaacaaaacggttaccgct
gaaactcaagtttatcttggtgataccatgggtgaaatgctagttctgatcggcgcggct
gatgtgtgctttatgggcgggagtttacttggcgataaagtcggtgggcacaatgtttta
gagcctgctgcgctaggtgtgcctgttattatagggccgagttattataactttaaagag
attgtggatacgttacgaggtgaacaagggattgttatttgtgagccgactcaacttagt
aatcacatcgtcaagctgattgatgatagtactgaatatcaattacttcaaaactccgct
tctaatgttgttcaaagtaatcaaggtgctttaaatcgtacgatcgctatctcaaatata
taa
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