Aliivibrio salmonicida: VSAL_I0249
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Entry
VSAL_I0249 CDS
T00782
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein RffA
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00541
Biosynthesis of various nucleotide sugars
vsa01100
Metabolic pathways
vsa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VSAL_I0249 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsa01007
]
VSAL_I0249 (rffA)
Enzymes [BR:
vsa01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
VSAL_I0249 (rffA)
Amino acid related enzymes [BR:
vsa01007
]
Aminotransferase (transaminase)
Others
VSAL_I0249 (rffA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAQ77934
UniProt:
B6EPD1
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All DBs
Position
1:294239..295381
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AA seq
380 aa
AA seq
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MIPFNKPPVTDNEISYIDQAIKSGCLAGDGHFSKKCETWFENATGAQKTLLTPSCTHALE
MAALLIDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDVHPETMNINENLIEAAITKKT
KAIVPVHYAGVACEMDLIMSLAHKYSLFVIEDAAQGVMSTYKGKALGSIGHLGAFSFHET
KNYTSGGEGGLLLINDSRFIKRAEILREKGTNRSQFFRGMVDKYSWVDVGSSFLPSEIQS
AYLWAQLGSADKINKKRLSDWLFYFNKLLPFQHEGLIDLPHIPEEVKHNAHMFYIKVENL
EVRTQVLNKLKDRGILAVFHYIPLHSSIAGLQFGRFHAEDKYTTEESERLLRLPMFYNLL
ESERELVCNELIKILKEIQS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgattccatttaataaaccaccagtaacagataatgagatttcatatattgatcaagca
attaaaagtggttgtcttgccggagatggacatttttcaaaaaaatgtgaaacctggttt
gaaaatgctactggagcacaaaaaaccttgttaacaccttcatgtactcacgcattagag
atggcagctcttcttattgacattcagcctggtgatgaagttattatgccaagctatacc
tttgttagtactgcaaatgcttttgtcttaagaggtgctaaaattattttcgttgatgtt
caccctgaaactatgaacattaatgagaatttaattgaagctgcaataacaaaaaaaaca
aaggcgattgttcctgttcattatgctggtgttgcgtgtgaaatggatcttattatgagt
ttagctcataagtattcattattcgtaatagaggatgctgctcaaggggtaatgtctact
tataaaggaaaagcgttaggctctattggccatttaggggcttttagttttcatgaaact
aaaaattacaccagtggcggtgaggggggactattgcttattaatgactctagatttata
aaacgagcagagatactaagagaaaaaggaacaaatcgtagtcaattctttagggggatg
gtagataaatacagctgggttgatgttggaagcagtttccttcctagtgaaattcaatcg
gcttatttatgggctcaattaggtagtgctgataaaattaataaaaaaagattatctgat
tggttgttttactttaataaactacttccatttcagcatgaaggtttaatcgatttacct
catataccggaagaagtaaaacacaatgctcacatgttctatattaaagtagaaaattta
gaggttagaactcaagttttaaataaacttaaagatcgaggtatattagctgtattccac
tatataccattacatagttctatcgctggtcttcaatttggtcgttttcatgctgaagat
aaatatacaaccgaagaaagtgaacgattgttaagattgccaatgttttacaacttgtta
gaaagtgagagagaacttgtgtgcaatgagttaattaagattctaaaggaaattcaatca
tga
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