Aliivibrio salmonicida: VSAL_I0503
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Entry
VSAL_I0503 CDS
T00782
Symbol
kdsD
Name
(GenBank) arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00541
Biosynthesis of various nucleotide sugars
vsa01100
Metabolic pathways
vsa01250
Biosynthesis of nucleotide sugars
Module
vsa_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VSAL_I0503 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
VSAL_I0503 (kdsD)
Enzymes [BR:
vsa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
VSAL_I0503 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
vsa01005
]
Lipid A
VSAL_I0503 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF3659
Motif
Other DBs
NCBI-ProteinID:
CAQ78188
UniProt:
B6EMA7
LinkDB
All DBs
Position
1:complement(561366..562340)
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AA seq
324 aa
AA seq
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MATQFDFCKAGKNVLQIEIDALTQLNNYINDDFTKACQLMLECKRKVVIMGMGKSGHIGK
KIAATLASTGTPSFFVHPGEASHGDLGMIEKGDVILAISNSGEAAEILALLPVIKRQGIT
LITMTSKSSSSMANVADVNLLITVPQEACPLALAPTSSTTATLVMGDALAMALLEARGFT
SDDFALSHPGGALGRKLLLHLADIMHTDDELPMVTSDALIKTALLEVSEKGLGMTAIVDE
DQKVIGIFTDGDLRRLLDNRIDIHTQTIGEVMAHTPSVASPNLLAVEGLNLMQDKKINGL
LLCDENNRLVGALNMHDLLKAGVM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcagtttgatttctgcaaagcaggaaagaatgttcttcaaattgaaattgat
gcacttacccaactgaacaattacatcaatgatgattttactaaagcatgtcaattaatg
ctggaatgcaaacgtaaagtcgttataatgggaatggggaaatcgggacacataggcaaa
aagatagcagctacattggcaagtaccggtactccctctttctttgtgcatccaggcgaa
gcaagtcatggcgatttaggcatgatagaaaaaggggatgtcattttggctatatcaaac
tcaggagaagcggccgaaatattagcgcttctgcctgtcattaaacgccaaggtattacg
ttaattaccatgacaagcaaatcaagctcaagcatggcaaacgtggcagatgtaaatcta
ctcatcaccgttccacaagaagcatgcccgcttgctttggctccaacatctagcacaaca
gcaacgctagtcatgggggatgcattagcaatggctcttttagaagctcgtggattcacc
tctgatgactttgcactatctcaccctggtggtgctcttggtcgtaagctattacttcat
cttgcagatatcatgcatacagacgatgaattaccaatggtaacgtcagacgcattaatt
aaaacagccttattagaagtctcagaaaaaggcctcggtatgaccgctatcgttgatgaa
gaccaaaaagtcattggtatctttaccgatggtgatttacgtcgtcttctggataaccgc
attgatattcacacacaaaccattggtgaagtcatggctcatactccttcagttgcaagc
cctaatttattggctgttgaagggctaaacctaatgcaagataaaaaaattaatggctta
ttgctatgcgatgaaaacaatcgcttagtcggcgcattgaatatgcatgatcttctaaaa
gcaggagtaatgtaa
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