Aliivibrio salmonicida: VSAL_I0562
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Entry
VSAL_I0562 CDS
T00782
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vsa03036
]
VSAL_I0562 (xerD)
Chromosome and associated proteins [BR:
vsa03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
VSAL_I0562 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
CAQ78247
UniProt:
B6EMW8
LinkDB
All DBs
Position
1:616155..617057
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AA seq
300 aa
AA seq
DB search
MVMNNDMALIERFLDTMWMERGLSENTLSSYRNDLMKLLNWLDENHYKCASISAMGLNEY
QAYLVDKQYKQTSRARMLSALRRFFQYLHREKIRGDDPTALLMSPKLPQRLPKDLSEEQV
NDLLEAPNVDDPLELRDRAMLELLYATGLRVTELVSLTMENLSLRQGVVRVTGKGDKERL
VPMGENAVYWIQTFLDQGRSTLLGEKSSDVVFPSRRARQMTRQTFWHRIKHYAVIAGIDT
DKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHQEHHPRS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaataatgatatggcgttgatcgagcgttttttagataccatgtggatggaa
cgtggattatctgaaaatacgttgtcttcttatcgaaacgatttaatgaaattattgaat
tggttagatgagaatcactataagtgtgcttctatctctgcaatgggattaaatgaatac
caagcttatttagttgataaacaatataagcaaacatctcgagctcgtatgctttctgct
ttgcgtcgatttttccagtatttacatcgtgaaaaaattagaggtgatgatcctaccgcg
ttattaatgagtcccaagttaccgcaacgattaccgaaagatctaagtgaagaacaagta
aatgacttactggaagcgcctaatgtcgatgatccattagaactccgtgatcgcgctatg
ttagaactactttacgcgacaggtttgcgtgtgacggaattagtgagtttaacgatggaa
aatttgagtttacgtcaaggtgtcgtacgagttactggtaagggagataaagagcgtttg
gttccaatgggagagaacgcggtttattggattcaaacatttttagatcaaggtcgatca
actctattgggcgaaaaaagctcagatgtggtttttcctagtcgacgtgcaagacaaatg
acaagacagacattctggcatcgcataaagcattatgccgtaattgcagggattgatacg
gacaaattatcgcctcacgttttacgccatgcttttgcgacacatttgctaaactatggg
gcagatcttagagtcgtacaaatgttgttgggacatagtgatctttctaccacacaaata
tatactcatgtagcaacagagcgtttgaaacagatacatcaagagcatcacccccgttct
taa
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