Aliivibrio salmonicida: VSAL_I0576
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Entry
VSAL_I0576 CDS
T00782
Symbol
hlyU
Name
(GenBank) transcriptional activator HlyU
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsa03000
]
VSAL_I0576 (hlyU)
Transcription factors [BR:
vsa03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
VSAL_I0576 (hlyU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
HTH_24
HxlR
MarR_2
DUF2582
TFIIE_alpha
HTH_11
HTH_34
HTH_1
HTH_28
DUF7344
MarR
TrmB
Rrf2
Sigma70_r4
DUF7342
HTH_IclR
Fe_dep_repress
HTH_Crp_2
GerE
HTH_9
DUF7346
HTH_40
Sigma70_r4_2
HTH_AraC
HTH_10
HTH_27
Motif
Other DBs
NCBI-ProteinID:
CAQ78261
UniProt:
B6EMY2
LinkDB
All DBs
Position
1:633619..633930
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AA seq
103 aa
AA seq
DB search
MAGIFMDLQQMEKNAPQAVTLLKAMANERRLFILCLLLEGELSVGQIAEQLSLSQSALSQ
HLGWLRKDALVSTRKESQTVFYSLSSHEVKSVIQLLHNLYCSK
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtatatttatggatttacaacaaatggagaaaaacgctccgcaagcagtcaca
ctactaaaagcaatggctaatgaacgtcgattatttattctttgtttattgctggaaggt
gaactttcagtaggtcaaatagcagaacagttgtcattaagtcaatctgcattgtctcaa
catcttggttggttgcgtaaagatgcgttggtttcgacaagaaaagagtctcaaactgtg
ttttattcattaagcagtcatgaagttaaatcagtaatccaattattacataatttatat
tgttcaaaataa
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