Aliivibrio salmonicida: VSAL_I0600
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Entry
VSAL_I0600 CDS
T00782
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsa03016
]
VSAL_I0600 (truB)
Enzymes [BR:
vsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VSAL_I0600 (truB)
Transfer RNA biogenesis [BR:
vsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VSAL_I0600 (truB)
Prokaryotic type
VSAL_I0600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAQ78285
UniProt:
B6ENE4
LinkDB
All DBs
Position
1:663141..664097
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AA seq
318 aa
AA seq
DB search
MARRRKGRPIDGVILIDKPAGITSNDTLQKVKRIYFAEKAGHTGALDPLATGMLPLCFGE
ATKFSQFLLDSDKRYRVVAKLGERTNTSDSDGEVVETREVKVDRGQLERCIAKFRGTTDQ
IPSMFSALKHEGRPLYEYAREGIEVPRKSRKITVYSIELIRFEGHEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVTYLRRTGVSNYPYENMVTIEHLEALLEKAHREEISPRELLDPLL
MPMDSAVQDLPEVNMITELADHVLHGQPVQVFGAPQDGIVRMTSGEERLFIGIGHIDDDG
RVAPKRLVVFRDEIEEDK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaagggtcgtcctatagatggtgttatcttaattgataaaccggca
ggaattacgtcgaacgatacattgcaaaaagtaaaacgcatctactttgcagagaaagcg
ggccatactggtgcgcttgatcctcttgctaccggtatgctgcctctttgttttggtgaa
gcgacgaagttttctcagttcttattggattcagacaagcgttatcgtgtggttgctaaa
ttaggtgaacgcacaaatacatctgactctgatggtgaagtggttgaaactcgtgaagta
aaagttgaccgtggtcagcttgaacgttgcattgccaagtttcgtggaacaaccgatcaa
attccatcaatgttttctgcgttaaaacatgaaggtcgccctttgtatgaatacgcacgt
gaaggcattgaagttcctcgtaagtctcgaaaaattacggtttattcaattgaattaatc
cgttttgaaggtcatgaagttgaaatggaagtgcattgttcaaaaggcacttacattcga
acaataacggatgatcttggcgaaatgttgggttgtggtgctcacgtaacgtatttacgc
cgcactggggtgtcaaattacccatatgaaaatatggtgacgattgaacaccttgaagca
ttattagagaaagcacatcgtgaagagatttcacctcgtgaattacttgatcctctatta
atgcctatggattccgcggtacaagatttacctgaagtaaatatgatcacagaattagcc
gatcatgttttacatggtcagccagttcaagtatttggcgctccacaagatggcattgtt
cgcatgacatctggtgaagaacgtttatttattggtattggtcatattgatgatgatggt
cgagttgcaccaaagcgtttagttgtatttagagatgaaatcgaagaagacaaataa
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