Aliivibrio salmonicida: VSAL_I0626
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Entry
VSAL_I0626 CDS
T00782
Symbol
radA
Name
(GenBank) DNA repair protein RadA (dna repair protein sms)
KO
K04485
DNA repair protein RadA/Sms
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I0626 (radA)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VSAL_I0626 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
SLFN-g3_helicase
DUF7125
GvpD_P-loop
AAA_22
nSTAND_NTPase5
AAA
nSTAND3
AAA_14
AAA_16
NTPase_1
ABC_tran
Zn_ribbon_Thio2
AAA_24
Viral_helicase1
AAA_5
Zeta_toxin
AAA_29
Zn_ribbon_8
DZR
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAQ78311
UniProt:
B6ENH0
LinkDB
All DBs
Position
1:690051..691430
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCSACGAWNTITEVRLAASPQVARNERLVGYSGSATDS
KVQTLSSIDLQEVPRFSSSFKEFDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCRLAS
EMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETSIDKICQIADKEKPKIMVIDSIQV
MHVDDVQSSPGSVAQVRESATTLTRYAKQNNVSIFLVGHVTKDGSLAGPKVLEHIIDCSV
LLDGSADSRFRTLRCNKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLSNPRRVSVGLDQNRLSMLLAVLHKHGGLQMADQDVFVN
VVGGVKVAETSADLALIMALLSSFKDRPLPKDVVVFGEVGLAGEIRPVPSGQERLMEAYK
HGFKRAIVPAANMPKGGIEGMQIHGVKKLSEAIDAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaacgtgcctacgtttgtaacgattgtggggcagactttcctcgttgg
caaggacagtgtagtgcttgtggggcgtggaacacgattacagaggttcgattagcggct
tctcctcaagtggctagaaacgaacgattggtcggatactcaggttctgctacggattct
aaagttcaaacgctatcaagtattgatcttcaagaggtccctcgttttagtagcagcttt
aaagagtttgatcgggtgcttggtggtgggattgttcctggtgcggctatcttaattggc
ggtaatccgggggctggtaaatccacactgctgttgcaaaccatgtgtcgcttagccagt
gaaatgccaacgttgtatgtaacgggtgaagaatcattacaacaagtcgccatgcgagca
tctcgtcttgggctgccaaaagataatttgaaaatgttgtctgaaaccagcattgataaa
atttgtcagatcgcagacaaagaaaaacctaaaataatggttattgactcgattcaagtg
atgcatgtagatgatgttcaatcgtctccaggcagtgttgctcaagttagagaatcagca
acaacacttactcgttatgcaaaacaaaataatgtgtctatatttcttgtggggcatgta
actaaagatggttcgcttgcaggaccaaaagtactggagcatattattgattgttctgta
ttacttgatggaagtgcagacagccgatttagaacattgcgttgtaataaaaaccgtttt
ggtgccgtaaatgaattgggcgtatttgcaatgacggggcaaggattgaaagaagtaaat
aatccgtctgcgatttttctatcccgtggcgaagaggaaacgtcaggcagttctgttatg
gttgtttgggaagggacacgcccgttattggttgaaattcaagcattagtcgattattcc
caactatctaatccacgtcgagtttctgttgggctagatcaaaaccgtttgtcgatgtta
cttgctgtacttcataaacatggtggtctgcaaatggcggatcaggatgtctttgtcaat
gtggttggtggcgtaaaagttgcagaaaccagtgccgatttagcattgataatggcgcta
ttatctagctttaaagatcgtccattaccaaaagatgtggttgtttttggtgaagtaggg
cttgccggtgaaatccgtccagttcctagtggtcaagagcgtcttatggaagcgtataaa
catggatttaaacgcgcgattgttcctgctgctaatatgccgaaaggggggattgaaggc
atgcaaattcatggcgtgaaaaaattatcagaggcaattgatgcttttgatgaactataa
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