Aliivibrio salmonicida: VSAL_I0864
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Entry
VSAL_I0864 CDS
T00782
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00260
Glycine, serine and threonine metabolism
vsa00460
Cyanoamino acid metabolism
vsa00630
Glyoxylate and dicarboxylate metabolism
vsa00670
One carbon pool by folate
vsa00680
Methane metabolism
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa01120
Microbial metabolism in diverse environments
vsa01200
Carbon metabolism
vsa01230
Biosynthesis of amino acids
vsa01240
Biosynthesis of cofactors
vsa04981
Folate transport and metabolism
Module
vsa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VSAL_I0864 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VSAL_I0864 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VSAL_I0864 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VSAL_I0864 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VSAL_I0864 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VSAL_I0864 (glyA)
Enzymes [BR:
vsa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VSAL_I0864 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAQ78549
UniProt:
B6EHX0
LinkDB
All DBs
Position
1:complement(965183..966433)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETVRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVETLAINRACELFGAEYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGQIDYEEMEALAIEHKPKMIIGGFSAYSQI
CDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQVRVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSG
IRVGSPSITRRGFSEEDAKNLAGWMCDILDNMGDESVIEATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacattgcagattacgatgcagacttgtttgcagcaatccag
gaagagacagtacgtcaagaagagcatatcgagctgattgcttctgaaaactacactagc
ccacgagtgatggaagctcaaggttcacaactaacaaacaagtatgctgaaggttaccct
ggtaagcgttactacggtggctgtgagttcgttgataaagtggaaacactggctatcaac
cgtgcatgtgaattgtttggcgcagagtacgcaaacgtacaaccgcattcaggttctcaa
gcgaacaatgccgtttacatggcactactaaacgctggcgataccgtgttaggtatgagc
cttgctcacggtggtcacttaactcacggttctccagtaaacttctctggtaagctttac
aacatcattccttacggtattgatgaagcgggtcaaattgactacgaagaaatggaagcg
ctagcaatagaacataaacctaagatgatcatcggtggtttctctgcttactctcaaatt
tgtgattgggcgcgtatgcgtgaaatcgcagacaaagttggtgcttactttttcgttgat
atggctcacgtagcgggtcttattgctgctggtgtttaccctaaccctgtcccacacgct
cacgtagtaacaacaacaacgcataaaacattggctggtcctcgtggtggtcttattctt
tctaacgaaggcgaagatctttacaagaaactgaactcagcagtattccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcggtggcatttaaagaagcactagaa
ccagaatttaaagaataccaagttcgtgttgttgctaatgcaaaagcaatggttgcagag
tttcttgctcgtggttacaacatcgtttcaggctctactgaaaaccacttgttcttggtt
gatttaatcgacaaagacatcactggtaaagaagccgatgcggctctgggttcagctaac
attaccgtgaataaaaactcagtaccaaacgatccacgtagcccgtttgttacttctggt
atccgtgttggttctccttcaattactcgtcgtggtttctctgaagaagacgcgaagaac
cttgctggctggatgtgtgacattctagacaacatgggtgatgagtctgttatcgaagca
actaaagcgaaagtattagaaatctgtaagcgtttacctgtatacgcttaa
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