Aliivibrio salmonicida: VSAL_I0945
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Entry
VSAL_I0945 CDS
T00782
Symbol
rotA
Name
(GenBank) peptidyl-prolyl cis-trans isomerase precursor
KO
K03767
peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:
5.2.1.8
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa01503
Cationic antimicrobial peptide (CAMP) resistance
vsa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VSAL_I0945 (rotA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VSAL_I0945 (rotA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsa03110
]
VSAL_I0945 (rotA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsa04147
]
VSAL_I0945 (rotA)
Enzymes [BR:
vsa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
VSAL_I0945 (rotA)
Chaperones and folding catalysts [BR:
vsa03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
VSAL_I0945 (rotA)
Exosome [BR:
vsa04147
]
Exosomal proteins
Proteins found in most exosomes
VSAL_I0945 (rotA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
HnRNPA1_LC
Motif
Other DBs
NCBI-ProteinID:
CAQ78630
UniProt:
B6EIB9
LinkDB
All DBs
Position
1:complement(1043240..1043797)
Genome browser
AA seq
185 aa
AA seq
DB search
MKLTSKVALLIAALGFNQSALAESVKFDTTLGSFTIELNAEKAPISVANFIRYVEDGSYV
GTQFHRVIPGFMAQGGGFDKDMLKKSNYGPIKNEGYNGLGNDTATVAMARTNNPDSATRQ
FYINLNDNDFLNANQRPPGYAVFGKVTQGFDIIQKMASKPTKALANGMRDIPVEPIIITK
ATLIK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacatcaaaagtggctcttttaattgccgcacttggcttcaatcaatcagca
ttggctgaatccgtaaaatttgataccacattagggagctttactattgagctcaatgca
gagaaagcgccaatttctgtcgctaactttattcgctatgtcgaagatggaagctacgta
ggaacgcaattccatcgagtgatccctggctttatggctcaaggcggcggttttgataaa
gacatgctgaaaaaatcgaattatggcccaattaaaaacgaaggttataacggtttaggt
aatgataccgctacggttgcaatggctcgtaccaataacccggattcagcaactcgtcag
ttttacattaacttaaatgacaatgatttcttaaacgcaaatcaacgtccaccaggttat
gctgtttttggtaaagtaacccaaggttttgacattattcaaaaaatggcctcaaaacca
accaaagcccttgccaatgggatgcgtgatattcccgttgagccaattatcataactaaa
gcaacattgattaaataa
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