Aliivibrio salmonicida: VSAL_I1085
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Entry
VSAL_I1085 CDS
T00782
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03030
DNA replication
vsa03430
Mismatch repair
vsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSAL_I1085 (dnaX)
03430 Mismatch repair
VSAL_I1085 (dnaX)
03440 Homologous recombination
VSAL_I1085 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_I1085 (dnaX)
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I1085 (dnaX)
Enzymes [BR:
vsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSAL_I1085 (dnaX)
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSAL_I1085 (dnaX)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSAL_I1085 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
ResIII
AAA_5
AAA_16
AAA_14
AAA_2
AAA_30
TsaE
AAA_19
nSTAND3
AAA_18
TniB
AAA_7
PIF1
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CAQ78770
UniProt:
B6EJ42
LinkDB
All DBs
Position
1:1180101..1182245
Genome browser
AA seq
714 aa
AA seq
DB search
MSYQVLARKWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK
GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISV
DQIHAQLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAIALGNGNVTADIVSMM
LGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQALPA
TLDKTQPDAERIELLSGQLSPQEVQLFYQIALQSRNDLPLAPTEKTGVEMMLLRMVAFRP
VHAQAIEALPIAVPSMEPAAVNVAPQQPAPASRVQQVIASAPNAEVPVAPKPMQPQAVSQ
TVYSPVSNSQQSSSAPLDSTEAQPPVYDAPPMGESSQSDSAPVQNIPQEPIATPRSGLLG
VRNQLRSAKNNLSNTTTGTSPKKGSAASDKKKTSSVLERIAEKQHLAPRTQVSQLGTSVS
QEKKPEEPYRWKASQPEVKKVVSDITPTKLKQALEHEKTPEMVQELVDETVKQDTWSALA
MSLALPKLVQQLVLNSSFEEHDDQVSLHLRSAQSHLINDKAHELVSQALSSALNKEIKLN
IDISAEGTSPLELREQMYQTKLQTAYQSLQQDPHVNFFMQRYGAEIDQESVRPI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttctggcacgtaaatggcgaccacatcattttaaagatgttgttggt
caatcccatgtgcttacggcgttggaaaacgcgcttgaccataatcgacttcatcacgct
tacttatttagtggcactcgcggtgtgggtaaaactactattgctcgtttgttcgctaaa
ggactaaactgtgaagaggggattacatcaacaccttgtggcgtgtgttctacctgtaaa
gaaattgatgaaggacgatttgtcgatttacttgagattgatgccgcttctagaaccaaa
gtagaagatactcgtgatctattagataacgttcaatataaacctgcgcgtggtcgtttt
aaggtttatttgatcgatgaagttcacatgctatcgcgacacagtttcaatgcattatta
aaaacattggaagagccgccagaatacgtcaaattcatattagccacgaccgatccacaa
aaactgcctgtgacgattttatctcgttgcttacagtttcatctgaaacacatcagtgtt
gatcaaattcatgcgcaattagatctcgttttagacaaagaagaagtgtctaaagatgga
agagcgttagggctgatagctcatgcggcagatggcagtatgcgtgatgcattaagtttg
accgatcaagcgattgcgttaggtaatggtaatgtaactgctgatattgtgtctatgatg
ttgggtacgttagataccgatcaagcgattcgtattctagaagcgatcagcacaaaaaac
atgcaaacgctgatgagctgtatcaatgatttagcagatattggtgttgagtgggatggg
ttagcaaaagaaattgcggcacaactgcataaattggcgatgtaccaagcgttacctgca
acgttagataaaactcaaccggatgctgagagaattgaattattgagtggtcagttatcg
ccacaagaagttcaattgttctaccaaattgcattgcaaagccgtaatgatttaccttta
gccccaaccgaaaaaacgggcgtagagatgatgttattgcgtatggtcgcatttcgtcct
gtgcatgctcaagcaatagaggcattaccgattgccgtgcctagcatggaacctgctgcc
gtaaatgttgcacctcaacaacctgcgccagcctctagagttcagcaagttattgcatca
gctccaaatgctgaagtgcctgttgctcctaagccaatgcaaccgcaagcagtatctcaa
acggtgtattctccggtttctaattcgcaacaatcgagttcagcaccgttagattctaca
gaggctcaaccgccagtatatgatgcaccaccaatgggggaatcatcacaatctgattcc
gcaccagtgcaaaatatacctcaagagcctatagcaaccccaagaagtgggttgttaggt
gtgcgtaatcaattacgtagtgcaaaaaataatttatcaaatacaaccaccggtactagc
ccaaaaaagggtagtgcggcatccgataagaaaaaaacgagctcagtgttagaacgtatt
gctgaaaagcaacatctcgctcctcgtactcaggtgtcgcaacttggaacgtctgtttct
caagagaaaaagccagaagaaccataccgttggaaagccagccagcctgaagtgaaaaaa
gtagtgagtgatattactcctacgaaattaaagcaggcacttgaacatgaaaaaacacct
gagatggttcaagaacttgttgatgaaacagtaaagcaagatacgtggtctgcattagcg
atgtcattagcgttgcctaaattggtacaacaacttgtattgaattcttcttttgaagaa
catgacgatcaggtttcattgcatttacgttctgcacaatcacatttaattaatgacaag
gcgcatgaattggttagccaagcgttaagctctgctctaaacaaagagattaaattaaac
attgatattagtgcagaaggtacaagcccgttagagttacgtgagcaaatgtatcaaact
aaattacagacggcataccagagcttgcaacaagatcctcatgttaatttctttatgcag
cgttacggtgcagaaatagatcaagaaagcgtgagaccaatttaa
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