Aliivibrio salmonicida: VSAL_I1197
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Entry
VSAL_I1197 CDS
T00782
Symbol
gadB
Name
(GenBank) glutamate decarboxylase beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00250
Alanine, aspartate and glutamate metabolism
vsa00410
beta-Alanine metabolism
vsa00430
Taurine and hypotaurine metabolism
vsa00650
Butanoate metabolism
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa01120
Microbial metabolism in diverse environments
vsa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VSAL_I1197 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VSAL_I1197 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VSAL_I1197 (gadB)
00430 Taurine and hypotaurine metabolism
VSAL_I1197 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSAL_I1197 (gadB)
Enzymes [BR:
vsa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
VSAL_I1197 (gadB)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
DUF5393
DUF2922
Motif
Other DBs
NCBI-ProteinID:
CAQ78882
UniProt:
B6EJL8
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All DBs
Position
1:1304769..1306163
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AA seq
464 aa
AA seq
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MPLHSKDTVRDDLLDDVYSSTDLSLSMPKYKMPEHEHDPRHAYQVVHDELMMDGNSRQNL
ATFCQTWVEDEVHKLMDECIDKNMIDKDEYPQTAELEARCVHMLADLWNSPDAENTLGCS
TTGSSEAAMLGGMALKWAWREKMKKLGKPTDKPNMICGPVQVCWHKFARYWDIELREIPM
EGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHEALDKLQEETGLDIPMHI
DAASGGFLAPFCDPELEWDFRLPRVKSINASGHKFGLSPLGVGWVIWRDASALHEDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYRKIHQACYDTAVYLSAEIEKMGM
FDIIYDGKGGIPAMSWSLKEGVNPGFNLFDLSDRIRSRGWQIAAYAMPPKREDLVIMRIL
VRHGFSRDQADLLVADLKHCIEFFDKHPISHGSDEVESSGFNHG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcattctaaagatacagtcagagacgatcttcttgatgatgtttattcatca
actgacctttccctatctatgccaaaatacaaaatgcctgagcacgaacatgatcctcgt
catgcttatcaagttgttcatgatgagctaatgatggatgggaattctcgacagaattta
gcgaccttttgccaaacttgggttgaagatgaagtccacaaactaatggacgaatgcatc
gataaaaacatgatcgataaggatgaatatcctcaaaccgcagagcttgaagctcgttgt
gtgcatatgttagctgatttatggaactctccagatgcagaaaatacgttaggttgttct
actacggggtcaagtgaagccgcaatgctcggcggaatggcgctaaaatgggcttggcgt
gaaaaaatgaaaaaacttggcaaaccaacagacaaaccaaatatgatctgtggtcctgtt
caagtgtgctggcataaatttgctcgttattgggatattgaattacgtgagatcccaatg
gaaggcgatcgtctaattatgacgcctgaagaagtgattaaacgttgtgatgaaaatacc
atcggtgtagttccaacgttgggtgtgacatttacttgtcagtatgaaccagtaaaagca
gtgcatgaagcgttagataaactacaagaagaaactggtttagatattccaatgcacatt
gatgcggcgagtggcggtttcttagccccattctgtgatcctgagttagagtgggatttc
cgtttacctcgtgtgaaatcaatcaatgcgtcaggccataaatttggtttgagtccatta
ggtgtgggttgggtaatatggcgtgatgcatctgcattgcacgaagatcttatttttaac
gtgaattacttaggtggcaacatgcctactttcgcgttgaacttctctcgccctggcggc
caaattgtagcgcaatactataatttcttacgtttaggtaaagaagggtaccgtaagatc
caccaagcgtgttacgacacggcggtgtatctttctgctgaaatcgaaaaaatgggcatg
tttgacattatttatgatggtaaaggtggtatccctgcaatgagttggtcgcttaaagaa
ggcgtgaaccctgggtttaacttgtttgatctttcagaccgaattcgttctcgcggttgg
caaattgccgcttatgcaatgccaccaaaacgtgaagacttggtgattatgcgtattttg
gttcgtcatggctttagccgagatcaagctgatctactggttgccgatctgaaacattgc
atcgagtttttcgataagcacccaatctcccatggtagtgatgaagttgaatcttcaggc
tttaatcacggttaa
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