Aliivibrio salmonicida: VSAL_I1673
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Entry
VSAL_I1673 CDS
T00782
Name
(GenBank) DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSAL_I1673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I1673
Enzymes [BR:
vsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VSAL_I1673
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSAL_I1673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAQ79358
UniProt:
B6EMH3
LinkDB
All DBs
Position
1:complement(1768022..1768630)
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AA seq
202 aa
AA seq
DB search
MDEQTIEQGLKALCLIDKDLEAAVKTQGYPSPRVNPHGFEAFLSIIVSQQLSTKVAAVIM
GRLVALLKEVTPERLLSIEEQNLRDVGLSWRKIEYAKGLALAVQSGNLDIDGLESLSDED
AISAITSLKGFGRWSAEIYLMFSLGRQDIFPADDLGVLIALGRLKGLTDKPTPKQAREMV
GHWQPWRSVGSLFLWQYYHQDA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagacaatagagcagggattaaaagcactctgtctgatagataaagatctt
gaagccgcagtaaaaactcaaggttacccatcgccaagagtgaaccctcatggatttgag
gcttttttatctattatcgtcagccaacaactgtcaactaaagtggcggcggtgataatg
ggtcgtttggttgcgttattaaaagaggtcactccagaaaggctcttgagcattgaagag
caaaaccttcgtgatgttggtttatcttggcgtaagattgaatatgcaaaagggctagcc
ttagccgttcaatcgggaaaccttgatattgatggcttagagtcattaagtgatgaagat
gctatcagtgctataaccagtttaaaggggtttggtcgttggagtgctgagatttatttg
atgttttcattaggacgacaagatatttttcccgctgatgatttaggggtattgatagca
ttaggaagactgaaaggacttactgataaaccaacaccaaaacaagcgagagaaatggta
gggcattggcaaccatggagaagtgtcggctcgttatttctttggcagtattatcatcaa
gatgcctaa
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