Aliivibrio salmonicida: VSAL_I1767
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Entry
VSAL_I1767 CDS
T00782
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_I1767 (gyrA)
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I1767 (gyrA)
Enzymes [BR:
vsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VSAL_I1767 (gyrA)
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Topoisomerases
VSAL_I1767 (gyrA)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VSAL_I1767 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAQ79452
UniProt:
B6EN41
LinkDB
All DBs
Position
1:complement(1879456..1882113)
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AA seq
885 aa
AA seq
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MRDIGSMSDLAKGITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDV
LGNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDG
DSAAAMRYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTRVPNLLVNGSSGI
AVGMATNIPPHNLTEVVNGCLAFIENEDITIDELINYIPGPDFPTAALISGRKGIVDAYK
TGRGKVYMRSKANIEADKNGKETIIVTEIPYQVNKARVIEKIAELVKDKKVEGISALRDE
SDKDGMRIVIECKRDAVGEVVLNNLFSLTQLQTTFGVNMVALDNGQPKLFNLKEMLKCFV
DHRREVVTRRTIFELRKARDRAHILEGLALALANIDEIIDLIKNAPSPAEAKQGLVARGW
DLGNVADMLERAGTDAARPDWLEPEFGIREGQYFLTEQQAQAILELRLHRLTGLEHEKIL
DEYKALLDEIAELMHILASTERLMEIIRDELITVRDTYGDERRTEIGAAIHDIDIEDLIT
QEDVVVTLSREGYVKYQILGDYEAQRRGGKGKSATKMKDTDYIERLLVANTHDNILCFST
RGKAYSLKVFQLPQASRTARGKPIVNILPLEEGERITAILPVSEYSEDKFIFMATGDGTV
KKTSLDQFAKVRANGLIAVNLREDDSLIGVDITTGSNEIMLFSKAGKVVRFSEEHVRGMG
RTASGVRGMKLTGEDQVVSLIVPSNEGDILTVTENGYGKRTKISEYPTKSRATQGVVSIK
VSDRNGSVVGAVQAEDGDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRTAEDENVVG
LQRIDEPEELEILEGDVVEGEEEATVITEATETPDAESDEDTTEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
ttgagggatattggctctatgagcgatcttgctaaagggatcacgcccgtaaatattgaa
gatgagcttcgaggttcatacctagactatgcgatgtcagtaatcgttggtcgtgctctt
ccagatgtgcgtgatggtctaaaacctgtacaccgccgtgttttattcgcgatggatgta
ttaggtaatgattggaataaaccatataaaaaatctgcccgtgtcgtcggcgacgtaatt
ggtaagtatcacccacatggtgatagtgctgtatacgacacgatagtacgtatggcgcag
ccgttctcactacgctatatgcttgttgatggccaaggtaactttggttctatcgatggt
gactctgctgcggcaatgcgttataccgaagttcgtatgtcgaaaattgcccacgaattg
ttggccgatttagacaaagaaaccgtcgattacgttcctaactatgatggtacagaacag
atccctgcggtattacctactcgtgtacctaacttattagttaatggttcatcaggtatc
gcagttggtatggcaactaatatacctcctcataacttaactgaagtggttaatggttgt
ttagcattcatcgagaatgaagatattactatcgatgagctaataaactacattccaggt
cctgactttccgacagctgcattaatcagtggtcgtaaaggcatcgttgatgcatataaa
acaggccgcggtaaagtttacatgcgttctaaagcaaatatcgaagcggacaaaaatggt
aaagaaaccattattgttactgagatcccttatcaagttaacaaagcacgtgtgatcgaa
aagatcgctgagcttgttaaagataagaaagtcgaaggtatttcagcactgcgtgacgaa
tctgataaagatggtatgcgtattgttatcgaatgtaagcgtgatgcagtgggtgaggtg
gttcttaataacttattctcattaactcagcttcaaactacattcggcgtaaacatggtg
gcacttgataatggccaaccaaaactgttcaacttaaaagaaatgttgaagtgttttgtt
gatcaccgtcgtgaagtggtaactcgccgtacaatttttgaattacgcaaagcgcgtgat
cgtgctcatatccttgaaggtttggcgctggcattagcaaacattgatgagatcattgat
ctaatcaaaaatgcgccatcaccagcagaagcaaagcaaggcctagtcgctcgcggttgg
gatcttggtaatgttgccgacatgctagagcgtgctggtacagatgctgctcgtcctgat
tggttagagccagagtttggtattcgtgaaggtcaatacttcttaacggaacaacaagct
caagcaattctagaattacgtctacaccgtttaactggtttagaacatgaaaaaattcta
gatgaatacaaagcactattagatgaaatcgcagagctaatgcatatccttgcaagcact
gaacgtctaatggaaatcattcgtgatgaattaattacggttcgtgatacttatggtgat
gagcgtcgcactgaaattggtgctgctattcacgatatcgatatagaagacttaatcaca
caagaagatgttgtagtaacactttctcgtgaaggttatgttaagtaccaaattctaggt
gattacgaagcgcaacgtcgtggtggtaaaggtaagagtgcaactaagatgaaggacacc
gattatatcgagcgtctacttgttgctaacactcatgataatatcctttgcttctctaca
cgtggtaaagcatacagcttgaaagtattccaacttcctcaagcaagccgcaccgctcgt
ggtaagcctatcgtgaacattcttcctctagaagaaggtgagcgtattacagcgattcta
ccagtatctgaatattctgaagataagttcatcttcatggcaacaggtgatggtacggtt
aagaaaacatctttagatcaatttgctaaagttcgtgcaaacggcttaattgcagttaat
ctacgtgaagatgattcattaatcggcgtcgatattacgacgggttcaaatgaaatcatg
ctgttctctaaagccggtaaagtcgttcgtttcagcgaagaacatgttcgtggaatgggc
cgtactgcttcaggtgttcgtggtatgaaactgactggtgaagatcaggttgtttcattg
attgttccttctaatgaaggtgacattctaacggtgacagaaaatgggtacggtaaacgt
actaaaatttctgaataccctacgaagagccgtgcaacacaaggtgttgtttctatcaag
gtttcagatcgtaacggcagtgttgtcggtgcagttcaagctgaagatggtgatgagttc
atgatgatcacggatgcaggtacgttagttcgtacacgcgtatcggaagtaagccaagtg
ggtcgtaatacccaaggtgttacactgatccgtactgctgaagatgaaaatgtagttggt
ttacaacgcattgatgaaccagaagagcttgaaattcttgaaggtgatgtagtagaaggt
gaagaagaggcgacagtaattactgaagcaactgaaactcctgacgctgaatcagatgaa
gatacgacagaagaataa
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