Aliivibrio salmonicida: VSAL_I1873
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Entry
VSAL_I1873 CDS
T00782
Symbol
uvrB
Name
(GenBank) UvrABS system protein B (excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VSAL_I1873 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I1873 (uvrB)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VSAL_I1873 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VSAL_I1873 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
CAQ79558
UniProt:
B6EGH8
LinkDB
All DBs
Position
1:2007661..2009691
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AA seq
676 aa
AA seq
DB search
MTSAYELVSDYQPAGDQPQAIKTLNEGLENGLAHQTLLGVTGSGKTFTLANVIAKSGRPT
VIMAHNKTLAAQLYGEMKAFFPNNAVEYFVSYFDYYQPEAYVPTTDTFIEKDSSVNEHIE
QMRLSATKALLERKDAIIIASVSAIYGLGDPQAYLSMMLHLSRGDIINQRDILRRLAELQ
YKRNDMAFERGTFRVRGEVLDVFPAESEHEAIRIELFDDEVERISKFDPLTGSIITKDMP
RCTIYPKTHYVTPREKVLDAIEQIKVDLAERKKELLANNKLVEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRPQGEAPPTLFDYLPKDGLLIIDESHITVSQIGAMYKGDRSRKE
NLVEYGFRLPSALDNRPMRFDEFEARAPQTIYVSATPGKYEIEKSGSDIAEQLVRPTGLL
DPIIEVRPVGTQVDDLLSEIRIRTKVGERVLVTTLTKRMSEDLTEYLAEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQAI
GRAARNLEGKAILYADRITGSMEKAIGETERRREKQILHNEALGIVPTALKKNVADILEL
GDMTKNKRKIVAPKMKLSEVAEEGASYQSMTPQQLEKEVQRLEAKMYQHARDLEFEQAAK
VRDEVEKLRNQFITNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgcgtatgaattagtttcagactatcaaccagcaggggatcaacctcaggca
attaaaacgttaaatgaagggctagaaaatggtcttgctcatcaaacgttgttaggggtt
actggatcaggtaaaacattcacactggcgaatgtgattgctaaatcaggtcgtcctacc
gtgataatggcacataataagacattagctgctcaactttatggtgaaatgaaagctttt
ttccctaataacgctgtggaatattttgtttcttattttgattattatcaaccagaggct
tatgtcccaaccacggatacctttatagaaaaagactcatcggttaatgagcatatcgag
caaatgcgtctctctgcgacaaaagcattattagaacgtaaagatgcgattattatcgct
tctgtttctgcgatttatggtcttggcgatcctcaagcgtatttaagtatgatgctgcat
ttgagtcgaggggatatcattaaccaacgtgatattttacgtcgattagctgaattacaa
tataaacgtaatgacatggcttttgagcgaggtacattccgtgttcgtggtgaggttttg
gatgtttttcctgcagaatcagagcatgaagcgattcgaattgagctttttgatgatgaa
gttgaacgtattagtaagtttgacccattaacgggttcaattattactaaagacatgcct
cgttgtactatatatccgaaaacacactacgtaacacccagagaaaaagtacttgatgcc
attgaacagataaaagtcgatttggctgagcgaaaaaaagaattattagctaataataag
ctagttgaagaacaaagaatctcacaacgaactcaatttgatattgaaatgatgaatgag
cttggtttttgttctggtattgaaaactattctcgttatttgagtggtcgtcctcaaggt
gaagcgccgcccactttatttgattatttacctaaagatggcttactgattattgatgaa
tcccacattaccgtgtctcaaataggggcaatgtacaaaggtgatcgttcacgtaaagag
aatttggttgaatacggttttcggttaccttcagcattagataaccgtcctatgcgcttt
gatgaatttgaagcccgtgctccacaaacgatttacgtttctgctacgcctggaaagtat
gaaatcgaaaagtcgggctctgatattgctgagcaattagtaaggcctactggtttactt
gatcctattattgaagtacgccccgttggaactcaagtggatgatttattatctgagatc
agaattcgtacgaaagtgggtgagagagtgttggtgacgacgcttaccaagcgtatgtct
gaagatttgactgaatatcttgcagagcatggagtgaaagttcgttatttacattctgat
attgatacggttgagcgtgttgagatcatccgtgatttgcggttaggcaagtttgatgtg
ttagtcggcattaacttattgcgtgaaggcttagatatgcctgaagtgtctttagtcgcg
attttagatgcagataaagaaggcttcttacgatccgaacgatcattaattcaagcgata
ggacgtgctgctcgtaatttagaaggtaaagcgattttatacgcagatcggatcacgggc
tcaatggaaaaagccattggagaaacagaaagaagacgtgaaaaacagatattacataat
gaagcattaggtattgtgccaaccgcattgaaaaaaaatgtggctgatattcttgaattg
ggggatatgactaagaataaacggaaaatagtcgcacctaaaatgaagctatcagaagtg
gcagaagaaggagcgagttatcaatcgatgacgccgcagcaattagaaaaagaagttcaa
cgattagaagcaaaaatgtatcaacatgcgagagatctagagtttgaacaggctgctaaa
gtaagggatgaggtagagaaattaaggaatcaatttataacgaatagttaa
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