Aliivibrio salmonicida: VSAL_I1949
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Entry
VSAL_I1949 CDS
T00782
Symbol
oppD
Name
(GenBank) oligopeptide transport ATP-binding protein D
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa01501
beta-Lactam resistance
vsa02010
ABC transporters
vsa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSAL_I1949 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSAL_I1949 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSAL_I1949 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsa02000
]
VSAL_I1949 (oppD)
Transporters [BR:
vsa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VSAL_I1949 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
DO-GTPase2
AAA_16
nSTAND1
DUF87
ABC_ATPase
ATP-synt_ab
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAQ79634
UniProt:
B6EH52
LinkDB
All DBs
Position
1:2086048..2087013
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AA seq
321 aa
AA seq
DB search
MSLLDVKDLRVEFTTQDGNVTAVNDLNFSLEQGETLGIVGESGSGKSQTVFALMGLLAKN
GIITGSAKFEGKEVLNLPEHELNKIRAEQMAMIFQDPMTSLNPYMKVSAQLMEVLMLHKG
MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
TALDVTIQAQIMQLLNELKSEFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGTVNEI
FYEPSHPYAEGLLKAIPRLDQVGDILPTIPGNPPNLLRLPTGCPYQERCHRVMDRCKQEA
PILLPFGDGRLRACFSDQGAW
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattagatgtaaaagatctgcgtgtcgagtttacaactcaagatggcaatgtc
accgcagtaaatgatttaaatttttcactagagcaaggtgagacattaggcattgttggc
gaatctggttcgggtaaatctcaaactgttttcgcattaatgggtctattagcaaaaaac
ggtattattacgggcagtgctaaatttgaaggtaaagaagttttaaatttaccagaacat
gaattgaataaaattcgtgcagaacaaatggcaatgattttccaagacccgatgacatca
ttaaatccttacatgaaagtcagtgctcagttaatggaagtattaatgcttcacaaaggc
atgggaaaagcagaggcatttgaagaatcagttcgaatgttagaagcggttaaaatccct
gaagctcgtaagcgtataacgatgtacccacatgagttctccggcggtatgcgccaacga
gtaatgattgcaatggccttattatgcagaccaaaattattgattgcagatgaaccaaca
acggctttggatgtaactattcaagctcaaatcatgcagttgttgaatgagttgaaaagc
gaatttaatacggcaattatcatgattactcatgacttaggtgttgttgctggttcttgt
gacaaagtattagtgatgtatgctggacgcacgatggagtacggtaccgttaatgaaata
ttttacgaaccaagtcatccatatgcggaaggtttgctaaaagcgatccctcgtttagat
caagttggcgatatactaccaacgattcctggtaatccaccgaacttactgcgtttacct
actggctgcccttatcaagagcgctgccatcgtgttatggaccgttgtaagcaagaagcg
ccgattcttctgccatttggtgatggtcgcttacgtgcttgtttttctgatcagggggcg
tggtaa
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