Aliivibrio salmonicida: VSAL_I2246
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Entry
VSAL_I2246 CDS
T00782
Name
(GenBank) putative DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03030
DNA replication
vsa03430
Mismatch repair
vsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSAL_I2246
03430 Mismatch repair
VSAL_I2246
03440 Homologous recombination
VSAL_I2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_I2246
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I2246
Enzymes [BR:
vsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSAL_I2246
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSAL_I2246
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSAL_I2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DUF2284
DNA_pol3_delta
AAA_22
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
CAQ79930
UniProt:
B6EJ05
LinkDB
All DBs
Position
1:2416217..2417188
Genome browser
AA seq
323 aa
AA seq
DB search
MATKLYPWQKEVWSQWQQLIEKDRLPHAILCAMPDGVGRDRLAQYFADTLVCLTQGTEPC
GFCHSCGLIESGNHPDLHWIRPEVEGKSISVDQIRQCNQWALESSQFNAKRVIIIDPAEK
MTESAANALLKTLEAPPKNCHFVLLASSPHKLLPTVRSRCQVWHQPSIPVPVIRDWLMET
EQLDVTQQSIIINGYSPLLVRGYYQDKKVIQHKQLLAEFAVYADSYFTNISGILPLLVKL
GDEGLCWLSYLLSDIQKVQLGVGTNLVHCDELTYVQKHAIKLNADLVYKQYLSLNELRQQ
LNSHPGLNKELLITQWLFEFIGA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaactctatccttggcagaaagaggtttggtcgcaatggcaacaattgatt
gaaaaggatcgattgccacacgccattttatgcgctatgcctgatggcgttggtcgagac
cgccttgctcaatattttgctgatacattagtttgcttgacacaaggaacggaaccttgt
ggtttttgccatagctgtggattaattgaatcaggtaatcatcctgatttgcattggatc
agacctgaagttgaaggaaaatctatttctgtcgatcaaattaggcagtgtaatcaatgg
gctttagaatcttctcaatttaatgcaaaacgcgtcattattattgatcctgccgaaaaa
atgacagagtctgccgcgaatgctttattaaagacattagaagcgcccccaaagaactgc
cattttgttttacttgctagttcaccgcacaaactattaccgacggttcggagtcgatgt
caggtctggcatcaaccaagtatccctgttcctgttatccgcgattggttaatggagact
gagcaattagatgtgacgcaacaatcgattataataaatggttattcgcctttacttgtt
cgtggttattatcaggacaaaaaagtcatccagcataaacaactacttgctgaattcgcg
gtttatgcggactcttactttaccaatatttcaggaatattacctttattggttaaatta
ggggatgaaggcttatgttggttaagctatttattatctgatatacaaaaagtacagcta
ggagtaggcactaacttagtgcattgtgatgaacttacttacgttcaaaaacatgcaatt
aagctcaacgctgatttagtatacaaacaatatttatcattaaatgagttgcgacaacag
ttaaatagtcatcctggattgaataaagaattattaattactcaatggttatttgagttt
attggagcgtaa
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