Aliivibrio salmonicida: VSAL_I2310
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Entry
VSAL_I2310 CDS
T00782
Symbol
flaM
Name
(GenBank) sigma-54 dependent response regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa02020
Two-component system
vsa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VSAL_I2310 (flaM)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VSAL_I2310 (flaM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vsa02022
]
VSAL_I2310 (flaM)
02035 Bacterial motility proteins [BR:
vsa02035
]
VSAL_I2310 (flaM)
Two-component system [BR:
vsa02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
VSAL_I2310 (flaM)
Bacterial motility proteins [BR:
vsa02035
]
Flagellar system
Flagellar assembly proteins
Others
VSAL_I2310 (flaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
MCM
MerR
AAA_16
HTH_20
HTH_24
Mg_chelatase
AAA_19
AAA_7
HTH_28
HTH_Mga
HTH_11
Sigma70_r4_2
FleQ
HTH_5
HTH_23
MerR_1
HTH_17
HTH_10
AAA
DUF2089
Motif
Other DBs
NCBI-ProteinID:
CAQ79994
UniProt:
B6EJE0
LinkDB
All DBs
Position
1:complement(2482344..2483780)
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AA seq
478 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALIDTLELAGYEWVEADSAETALLILKKEPVDIVVSDVQMAGM
GGLALLRSIKLNWPNLPVLLMTAYANIEDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKNEQTGNAIVADEKSLKLLKLADKVARTDANVMVLGPSGSGKEVMSRYIHNNSQRSEGP
FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQVK
LLRVLQEREVERLGGRKSIKLDVRILATSNRDLKKYVEEGNFREDLYYRLNVFPIAWPPL
KERKGDIIPLAQHLVERHCQKQGLPVPTLTSEAIAKLEIYPWPGNVRELDNVVQRALILA
EENYITADDILLEGVDWADASSLQKIVSGEVPTIKPEQQIPSINEPSVESTDSVNMDASS
SSTGLGGELREQEYIIILETIKACDGKRKEVAEKLGISPRTLRYKLAKMRDAGIDIPS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtattaattgttgaagatgatgaaggtctacgcgaagcattgatc
gacacattggaattggcagggtatgagtgggtagaggcggatagtgcggaaactgcatta
cttatcttgaagaaagaacccgttgatattgttgtttctgatgtgcaaatggcaggaatg
ggtggattagccttgcttcgtagcattaaattaaattggccgaatttgcccgttttattg
atgaccgcttacgccaatattgaagatgccgtttcagcaatgaaagatggcgcaattgat
tacatggcgaagccgtttgcgccagaagtgctgcttaatatggttagtcgctatgcgcca
gttaaaaacgaacaaacaggcaatgccattgttgctgatgaaaaaagcttaaaattactt
aagttagcagacaaagtggcaagaactgacgcgaacgtgatggtgcttggacctagtggt
tcaggtaaagaagtgatgtctcgctatattcataataattcccaacgcagtgaagggcct
tttattgccattaactgtgcggcaattccagataatatgttggaagcaaccttatttggt
tatgagaaaggtgcctttactggtgcagttcaagcgtgtccgggcaagtttgagcaagct
caaggtggcactatcttactggatgaaatcagtgaaatggaccttaacttacaagttaaa
ttgcttcgagtgcttcaagagcgagaagtggaacgtttaggtggccgtaagagcatcaaa
ttagatgttcgtattttggcaaccagtaaccgagatcttaagaaatacgttgaagaaggt
aatttccgtgaggatttatattatcgactaaacgtgttcccaattgcatggccgccatta
aaagaacgtaaaggggatattattcctctggctcaacatttggttgagcgtcactgtcaa
aaacaaggtctgccagtgccgacgttaacctctgaagcgattgccaaattagagatttat
ccttggcctggtaacgtacgtgaattagacaatgtagttcaacgtgcccttattttggca
gaggagaattacatcactgcggatgacatattacttgaaggggttgattgggctgatgca
agtagtttacagaaaatagtcagtggtgaagtgccaacgattaagcctgagcaacaaata
ccgtcaataaatgaaccttcagttgaatcaacagatagcgtcaatatggatgcatcaagt
tcgtcgacagggctgggtggggaattacgtgagcaagaatacattattattcttgaaacg
attaaagcgtgtgatggaaagcgcaaagaagtggctgaaaagctgggtattagcccaaga
acactgagatataaattagcaaaaatgcgtgatgctggaatagatatcccaagttaa
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