Aliivibrio salmonicida: VSAL_I2433
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Entry
VSAL_I2433 CDS
T00782
Symbol
secD
Name
(GenBank) protein-export membrane protein SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03060
Protein export
vsa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VSAL_I2433 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VSAL_I2433 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vsa02044
]
VSAL_I2433 (secD)
Secretion system [BR:
vsa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VSAL_I2433 (secD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
7TM_GPCR_Sri
Motif
Other DBs
NCBI-ProteinID:
CAQ80117
UniProt:
B6EK63
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Position
1:complement(2604648..2606504)
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AA seq
618 aa
AA seq
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MLNRFPLWKYLMVVSVLLIAALYALPNLYGEDPAVQITGSRGAEVQTSTLDVVAENLKNN
NIAYKSIAFENGSVLVRFKDTDSQISARDIISQSLGKYYVVALNLAALTPDWLTSIGAKP
MKLGLDLRGGVHFLMEVDMDAAMSKLVGQQEESFRTDLREAKIRYRAIRSSGKESVEVVL
RNAEQLEEAKNVLSDAHRDMTFVDSESNGQFKLIASFTDQRLQEIRNYAVEQNITIIRNR
VNELGVAEPLVQRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLSAAANGR
APAGSEIKEDRNGRPVVLKKRIILGGASITDASSSADEYGRPQVNISLDSEGGSKMTAFS
RKNIGKLMATVFTEYKDSGRRTPEGRVILAKTEEVINQATIQSALGRSFRITGIDSQAEA
HNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGVQACIWGMVAVMLFTLIYYRGFGL
VANLALAANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRN
PQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGT
RCVINLVYGGKRVDKLSI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaccgtttccctttatggaagtatttgatggtagtttctgtactacttatcgcc
gctctgtatgcgcttccaaacctttatggtgaagatccagccgttcaaatcacgggtagt
cgtggtgctgaggttcaaacctctacgctggatgtcgttgctgaaaatttaaaaaacaat
aacatcgcttataagtctattgcattcgaaaatggcagtgttcttgttcgctttaaagat
actgactctcagatcagtgccagagatattattagccagtcattaggtaaatattacgta
gtggcgttaaaccttgctgcactaacgcctgattggttaacgtccattggtgctaaacca
atgaagttaggcttagatttacgtggtggtgttcacttcttaatggaagtggatatggat
gccgcaatgagcaaacttgtcggccagcaagaagaatctttccgtactgatttacgagaa
gcgaagatccgttatcgtgctattcgcagttcaggtaaagaaagtgttgaagttgttctt
cgtaatgcagagcaactagaagaagccaagaatgtattatcagatgcgcatcgtgatatg
acgtttgttgattcggaatcaaatggccaatttaaattaatagcaagttttactgatcag
cgtttacaagagatccgtaattatgcggttgagcaaaatatcacgattatccgtaatcgt
gttaatgaacttggtgttgctgaaccattagttcaacgtcaaggtgcaagccgaattgtg
gttgaattacccggtgttcaagacaccgctcgtgcaaaagaaattttaggtgcaacggcg
acacttgagttccgcgaagtggatgacaaagcggatttgtcggctgcagctaatggccga
gcaccggcaggaagcgaaataaaagaagatcgaaatggtcgtcctgttgttcttaagaaa
cgtattattcttggtggagcgagcattacagatgcaagttcaagtgctgatgaatatggt
cgtcctcaagttaacatctcactagacagtgaaggtggcagtaagatgacggcgttctct
cgtaaaaatatcggtaagctaatggcaaccgtatttacagagtataaagacagcggtcgt
cgcacgcctgaaggtcgcgttattcttgctaagacagaagaagtgattaaccaagcaacg
attcaatcagctcttggtcgtagtttccgtattacgggtattgattctcaagctgaagct
cataacttagcacttcttcttcgtgctggtgcactaattgcgccaatctcgattgttgaa
gaacgcacgattggtccatcaatgggtcagcagaatattgatatgggtgttcaagcgtgt
atttggggtatggtagccgtaatgctatttactctaatttattatcgtggctttggtttg
gttgctaacttagcgcttgccgctaacttggtacttatcattggtgttatgtcgatgatc
cctggagcgacaatgacgcttcctggtattgccggtattgtattaactgttggtatggcc
gtggatgcaaacgtacttatctttgaacgtattcgtgaagagttaagagatggacgtaat
ccgcaacaagcgattcatcaaggttatgcaaacgcattcagtacgattgctgatgcaaac
atcacgacattaattacagcgattatcttatttgctgtaggtactggtgcgatcaaaggc
tttgcagtaacgctatcaattggtattttgacttcaatgtttacggctatcgtcggtact
cgttgtgttattaacttagtttacggcggtaagcgcgtagacaaactgtcgatctaa
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