Aliivibrio salmonicida: VSAL_I2551
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Entry
VSAL_I2551 CDS
T00782
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase (UDG)
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSAL_I2551 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I2551 (ung)
Enzymes [BR:
vsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VSAL_I2551 (ung)
DNA repair and recombination proteins [BR:
vsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSAL_I2551 (ung)
Prokaryotic type
VSAL_I2551 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
DUF3535
Motif
Other DBs
NCBI-ProteinID:
CAQ80235
UniProt:
B6EKY3
LinkDB
All DBs
Position
1:complement(2731716..2732390)
Genome browser
AA seq
224 aa
AA seq
DB search
MNTSWNDILETEKEKPYYQEMMTYINEARSQGKKIFPKEEDVFTAFSLTPFNNVTVVILG
QDPYHGEGQAHGLSFSVLPGVKIPPSLRNMYKELAEDIEGFIPPTHGYLESWAEQGVLLL
NTVLTVEESQAHSHAKLGWETFTDSIIEQLNEKKEGIIFLLWGAHAQKKGINIDAMKHSI
LVAPHPSPLSARRGFFGCQHFSKTNELLREKNLSEINWSSITLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcttggaatgacattttagaaacggaaaaagaaaaaccgtattatcaagaa
atgatgacgtatataaacgaagcacgttctcaaggaaaaaaaatattccccaaagaagag
gatgtgtttactgctttttcattgacgccatttaataacgttaccgttgtcattctaggt
caagatccctatcacggagaagggcaggcgcatgggctgtctttttctgtattaccagga
gttaagatcccgccttctctgcgcaatatgtataaagaattagcagaagatattgagggt
tttattccaccaacacatggttatttagaaagttgggctgagcaaggggtcttgttactt
aatacggtattaaccgttgaagaatcacaagctcattctcatgcaaagttaggatgggaa
acgtttactgacagcatcattgagcaattaaatgaaaaaaaagaagggattattttctta
ctatggggggctcatgctcaaaaaaaaggcattaatattgatgcaatgaagcactctatt
ttagtggctcctcatccttcccctttatcggcaagaagaggtttttttggttgtcagcac
ttttctaaaacaaatgaattgctgcgagagaaaaacttatccgaaatcaactggagttca
attacattggactag
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