Aliivibrio salmonicida: VSAL_I2575
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Entry
VSAL_I2575 CDS
T00782
Symbol
chiS
Name
(GenBank) chitin degradation sensor protein
KO
K19694
two-component system, sensor histidine kinase ChiS
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vsa01001
]
VSAL_I2575 (chiS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vsa02022
]
VSAL_I2575 (chiS)
Protein kinases [BR:
vsa01001
]
Histidine kinases
Other
VSAL_I2575 (chiS)
Two-component system [BR:
vsa02022
]
Other families
Unclassified
VSAL_I2575 (chiS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HAMP
PAS
Diguanyl_cycl_sensor
PAS_9
HATPase_c_3
PAS_8
PAS_4
VpsR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
CAQ80259
UniProt:
B6EL07
LinkDB
All DBs
Position
1:2770458..2773841
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AA seq
1127 aa
AA seq
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MDKKQHFKRLQNTLMIAFLVLSITPLSVIAIFFLHSHSQDLATQSTAHLVSLRDNKEQQV
SNYVKARKSEVLGFARSELANASGGRFYGLISAFPRLGNTIEDARSNAQIRYIGGSGNKI
RTSILPESDSYIGSERYSLLHKRYHWAYLELLKRSDFTDILLVDIDGNVVYSQKKEDNYG
TNLITGKYHDTPLGKTYSKIRSMMEKPENKDDIPVVFSDFSIMNGENVSWFAAPIVQQGY
LHSFVLFKLPNNGLSLLLKNGQQDSSSIKSYLVGDNSLSLISGISTDKNTSENIIQALSG
KTDVGSFTDKSNNSVLSAFTVVHIDDKVWGLSVELPEKEAFSRIKQLEQIFVIAMILAIV
CVVIASHFLSNSITAPLLRLTWVAERLSAGDLDQKMISTDRKDEIGRLAVSFARMQRSIR
EKIQLIKAQNEELETNLSIIQHKNQELEAADKLKDEFLATTSHELRTPLHGMVGIAEALY
TGANGPISASHRHQLEIIINSGQRLTNLVNDLLDYHKMRHGNLDINRHVADLSSATSLVL
ELSHHLLGNKPIRIINQVDKSLPSVYADEQRLEQVLYNLIGNAIKYTSEGKIVISASVVD
QFLRVQVVDTGHGIPADELEHIFEPLIQAGHDSNRYRQGSGLGLSISRQLIELMGGSLYV
SSQPMVGATFSFTLPLASKDQIQQHKSLTKEDIAHYQTPEKLEYNLDDLDETQPENPNGP
LLLVADDEPVNLQVLSSFLKLEGYRVKTANDGPETLKQLEEETPELVLLDVMMPGMSGYE
VCQEVRKQYSHSQLPIIMLTALNQTQDRVRGFESGANDYLSKPFNKQELAARIKAHLQAS
QAEIRLTENDRLQQEIRHREKVEASLLETQTHILGQLNHAQEAIICAKSDGKIQYVNHAA
AKLFLRTEEQLSRYSIDELIAKRSLIEGDKHHRGNIDVYIDGSIEQINADLVHLPPASGL
SLMLIVSHKNEASEQRIYDLESAVEALSAFAFEGDKQKLNSLSSIGGDIAQLAIKANENK
EDKGTIMRELIVDGMISALSYWEESTGHSKFTLAEESGLWRVYLDRSTLQTRTLDKYLRV
ESLPKTPRWRTVVSTLEYILEHCNEHNQDREKLIRIKDKLQILISSN
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaacaacactttaaacgtcttcaaaatacgttaatgattgcatttcttgtt
ttaagtattactcctctttctgttattgctatattttttctacactcacatagccaagat
ctcgcaactcaaagtacggcgcatcttgtttcattaagagacaataaagagcagcaagta
agtaactacgtcaaagctcgtaaatcagaagtgcttggctttgctcgttccgagttagct
aatgctagtggtgggcgtttctatggtttaattagtgcctttcctcgtcttggtaatacg
attgaagatgcgaggagcaatgctcaaattcgatacattggcggctctggtaataaaata
cgaaccagtattcttcctgaatccgattcttatattggcagtgaacgctatagtctactt
cataaacgataccactgggcataccttgaattattaaagcgatctgatttcactgacatt
cttttagtcgatatcgatggtaatgtcgtttattcccagaaaaaagaagataactacggt
actaatttaattacgggaaaataccacgacacaccacttggaaaaacctacagtaaaatt
cggtctatgatggaaaaaccagaaaataaagacgatattcctgtcgtattttctgacttt
tctattatgaatggagaaaatgtctcttggtttgcggcaccaattgtacagcaaggttat
ttgcacagcttcgtcttgtttaaactgccaaacaacggtctaagcctactattaaaaaat
ggacaacaagattcatcatcgataaaaagctatcttgttggtgataattctctttcttta
attagtggtatcagtaccgataaaaatacgtctgaaaatattattcaagcattaagcggg
aaaactgacgtaggtagctttactgataaaagtaataatagtgtactttctgcttttacc
gtggttcacattgatgacaaagtatggggactctctgttgaattaccagaaaaagaagcc
ttctctcgtatcaaacaattagaacaaatttttgttatcgcgatgatcttagccattgtg
tgtgttgttattgcttcccatttcttatcaaattcaattactgcacctttattgaggtta
acgtgggtagcagagagactctcggcaggcgatctcgatcaaaaaatgatcagcaccgat
cgaaaagatgaaataggacgattagcagtcagctttgcacgtatgcagcgatctattcgt
gaaaaaattcaattaatcaaagctcaaaatgaagaattagaaacaaacctttctattatt
caacataaaaaccaagaattagaagcggctgataaactcaaagatgaattcctagccacc
acatctcatgaattaagaacaccattacacggtatggtcggtattgctgaagccctttat
accggggctaatggtccaatctccgcttctcatcgtcatcaattagaaattataattaat
agtggccagcgcctaaccaacttagtgaatgatcttttggattaccacaaaatgcgtcac
ggcaatctggatataaatcgccacgttgccgacttatcatcggcaacaagtttggtttta
gagttatcgcatcatttgctgggcaacaaaccaataagaataatcaatcaagtagataag
tctttaccttctgtctatgctgatgaacaacgattagaacaagtactttataatttaatc
ggtaatgcgattaaatatacttcagaaggaaaaattgttatttcagcaagtgttgtcgat
caattcttacgagttcaagttgtcgatactggtcatggtattcctgctgatgaattagag
catatttttgaacccttaattcaagcagggcatgattctaatcgctatcgccaaggatca
gggcttggtttgtcaatcagtcgtcaattaatagaattaatgggtggatcgctgtacgta
agcagccaaccaatggttggcgcgacctttagctttactttacctttagcatctaaagat
caaattcaacaacataaatccctaacaaaagaagatattgctcattatcaaacaccagaa
aaactagaatataacttagacgatttagatgaaactcaaccagaaaatccgaatggtcct
ttacttcttgttgctgatgatgagcccgttaatttacaagtgttaagtagtttcttaaaa
ctggaaggctatcgcgtaaaaacggccaatgatggccctgagacattaaaacagttagaa
gaagaaacccctgaattagtgctactagatgtcatgatgccaggaatgagtggatatgag
gtatgccaagaggtcagaaagcaatatagccactctcaattgcctattatcatgctcacg
gctttaaaccaaactcaagatagagtgagaggttttgaatcaggtgctaatgactatttg
agtaaaccatttaataaacaagagctggcggcaaggataaaagcacatttacaagcaagc
caagcagaaataaggctaacagagaatgatcgcttacaacaagagatccgacatagagaa
aaagtagaagccagtttattagaaacacaaactcatatcttagggcaactaaaccatgcc
caagaagccattatttgtgctaaatctgacggtaaaattcaatatgttaaccatgcagca
gcaaaactttttttacgtacagaagagcaattgtcacgatattcaattgatgagttaatt
gctaaacgcagcttaattgagggtgataaacatcatagaggtaatatcgatgtctatatt
gatggttctattgaacaaattaatgctgacttagtacacctacctcccgcatcaggctta
tctctaatgcttattgttagtcataaaaatgaagccagtgagcagcgtatatatgattta
gaaagcgcggtagaagcattgtctgcgtttgctttcgaaggagataagcaaaagcttaac
tctttgtcttctattggtggtgacattgcacaattggcaattaaagcgaatgaaaataaa
gaagataagggaacaattatgcgagaactcattgttgatggcatgatatctgccctatct
tattgggaagaatctactgggcattcaaagtttacactcgcagaagaaagtggattatgg
cgcgtatatcttgatagaagcacattgcaaactcgtacgctagataagtatttacgagtt
gagtctctccctaaaacaccacgttggcgaacggtagtcagtacattggaatatattcta
gaacattgtaacgaacataaccaagacagagagaagctcataagaataaaagataagctt
caaattcttatttcatcaaattaa
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