Aliivibrio salmonicida: VSAL_I2607
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Entry
VSAL_I2607 CDS
T00782
Symbol
pcnB
Name
(GenBank) poly(A) polymerase (plasmid copy number protein)
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VSAL_I2607 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsa03019
]
VSAL_I2607 (pcnB)
Enzymes [BR:
vsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VSAL_I2607 (pcnB)
Messenger RNA biogenesis [BR:
vsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VSAL_I2607 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAQ80291
UniProt:
B6ELD9
LinkDB
All DBs
Position
1:2823105..2824430
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AA seq
441 aa
AA seq
DB search
MKLNVITRQEHNISRKDLSDNALKVLYRLSNAGYDAYLVGGGVRDIILGQEPKDFDIATN
ATPEQIKKLFRNCRLIGRRFRLAHILFGRDVIEVATFRGHHKEEESEKKNISSQSKEGML
LRDNVYGTVEEDAQRRDFTINAMYYNIADYSIHDYANGIEDLKNGVVRLIGDPETRYRED
PVRMLRAVRFAAKLDMTICNKTAEPMVELSPLLRDIPAARLFEESLKLLQAGKGLNTYLM
LRKFNLFQQLFPALTPFLTKEGNSQTEQMIELVLHSTDKRINSGQRVNPAFMFAAMLWYP
LTAQAKEIQNENSKLDEYESIMEASNIMLDIQVKSTAVPRRLTATIRDIWQLQLRLPRRT
GKRAFILIDQQKFRAAYDFLEMRGKVEGGDVKALAEWWTEFQDAPVPHRNNMIQGLHGGR
STGTRKRRSPYRKKKRTNNDS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactgaacgttatcacacgccaagaacataatatttcacgtaaagacttaagtgat
aatgcactcaaagttctttaccgcctaagcaatgctggatacgacgcctatctagtagga
ggaggtgtgcgcgatataattctaggacaagaacctaaagattttgatatcgccaccaat
gccactcccgagcaaatcaaaaaactatttagaaattgccgattgattggccgtagattc
cgtcttgctcatattctttttggcagagatgtcattgaggttgccactttccgtggtcac
cataaagaagaagaatcagagaaaaagaacatctcttctcaatcaaaagaaggcatgtta
ttgcgtgataatgtctatggcaccgttgaagaagatgcccaacgtcgtgactttacgatt
aatgcgatgtattacaacattgcagattactcaattcatgattatgccaatggcattgaa
gatttaaaaaatggtgtcgtacgtcttatcggtgatcctgaaactcgttatcgagaagat
cctgttcgaatgctacgtgcggtacgctttgctgcaaaattagacatgacaatttgcaat
aaaaccgcagaaccaatggttgaattgtccccacttttacgtgatatccctgcggctcgt
ttatttgaagaatcacttaaactacttcaagcaggaaaaggcttaaatacctatttaatg
ctgcgtaaatttaacttgtttcaacagttgtttcccgcgcttacgccatttttaacaaaa
gaaggcaacagtcaaacggaacaaatgatcgaacttgtattacattcaacagacaaacgt
ataaatagcggtcaacgagttaaccctgcattcatgtttgcagcaatgttatggtatcca
ttaacggctcaagcaaaagaaattcaaaacgaaaatagcaaacttgatgaatacgaatcc
attatggaagcgtctaatatcatgcttgatattcaagtaaaaagcacggcggtccctcgt
cgcttaaccgcgactattcgtgatatttggcaattacaactccgtttacctcgtcgtact
ggtaaacgtgcgtttattcttattgaccaacaaaaattccgtgctgcttatgatttcctt
gaaatgcgtggaaaagtagaaggtggtgatgtaaaagcactcgctgaatggtggactgaa
ttccaggacgcacccgttccacaccgtaataacatgattcaaggcttacatggtggccgt
tcaaccggtacacgtaaacgtcgtagcccttatcgtaagaaaaaaagaacgaataacgat
tcatga
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