Aliivibrio salmonicida: VSAL_I2974
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Entry
VSAL_I2974 CDS
T00782
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit, enoyl-CoA hydratase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00071
Fatty acid degradation
vsa00280
Valine, leucine and isoleucine degradation
vsa00310
Lysine degradation
vsa00362
Benzoate degradation
vsa00380
Tryptophan metabolism
vsa00410
beta-Alanine metabolism
vsa00640
Propanoate metabolism
vsa00650
Butanoate metabolism
vsa00907
Pinene, camphor and geraniol degradation
vsa00930
Caprolactam degradation
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa01120
Microbial metabolism in diverse environments
vsa01200
Carbon metabolism
vsa01212
Fatty acid metabolism
Module
vsa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VSAL_I2974 (fadB)
00650 Butanoate metabolism
VSAL_I2974 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VSAL_I2974 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VSAL_I2974 (fadB)
00310 Lysine degradation
VSAL_I2974 (fadB)
00380 Tryptophan metabolism
VSAL_I2974 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VSAL_I2974 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VSAL_I2974 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VSAL_I2974 (fadB)
00930 Caprolactam degradation
VSAL_I2974 (fadB)
Enzymes [BR:
vsa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VSAL_I2974 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VSAL_I2974 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VSAL_I2974 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VSAL_I2974 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAQ80658
UniProt:
B6EGU2
LinkDB
All DBs
Position
1:complement(3220462..3222642)
Genome browser
AA seq
726 aa
AA seq
DB search
MIYQGENLSVDYIENGIAHLVFNAAGSVNKLNIATLRSLGEAIDVLYKQKDLQALLLSSG
KSAFIVGADITEFLGLFDTPEEELSDWLHQANVIFSRLEDLPVPTLSAITGFALGGGCEC
VLATDFRLADDTASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALK
IGMVDGIVSRETLIDASVSMLKQAIDGQLNWQQRREQKKAPIQLSPLEAAMSFNVAKGMI
MKMAGKHYPAPLTAVKSIEQSANMHRDDALAIENKHFVALTRTDVAKSLVGIFLNDQLVK
SKAKQAVKNSEPVKNAAVLGAGIMGGGIAYQSASKGVPVLMKDIAQASLDLGMNEASKLL
NKQLERGRLSGLKMAQVLSSITPSLNYGGIETKDVIVEAVVENPTIKAAVLAEVENEVNE
HAILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAY
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGGNYQQIDKVMEKEFGWPMGPAYL
LDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFEDDRYGQKNGIGFYAYALDKKGKP
KKNIDEKTNAIIATITDSTQPYTSEQISARMMIPMINEVIRCLDEGIIASPAEADMALVY
GLGFPPFKGGVFRYLDSIGLDTYLDMAKEFEQLSPVYQVPDSIKQKAAAGECYYPAPKSS
VSSPSV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggtgaaaacctctctgtagattacatcgaaaacggcattgctcactta
gtctttaatgcggctggcagtgttaataaactcaatattgctaccctacgctcactaggt
gaagccattgatgttctctataagcaaaaggatttacaagcactgttactttcatcaggt
aaaagtgctttcattgttggtgctgacattacggagttcttagggttgtttgatacacca
gaagaagaactcagtgattggctgcatcaagctaatgtgatttttagccgactggaagat
cttcctgtaccgacattatctgcaattactggctttgctctgggcggtggttgtgaatgt
gtacttgctacggattttcgattggcggatgacaccgcgtcgattggcctaccagaaacc
caactaggtataatgcctggctggggcggttctgttcgtttacctcgcttaattggtgcc
gatcccgcaatggaagtcatcacaacaggtaaaccaaaacgcgctaaagatgcattaaaa
ataggaatggtcgacggtattgtttcacgtgaaacattgattgatgcctcagtatctatg
ctaaaacaagcgatcgatggtcaactaaattggcaacaacgtcgtgaacaaaagaaagcc
cctattcagttatcccctctagaagcggctatgtcgttcaatgtcgccaaaggcatgata
atgaaaatggctgggaaacattatcctgcaccactaactgccgttaaatctatcgagcaa
agtgcaaacatgcatcgtgatgacgctttggcgattgagaacaaacacttcgtggctctc
actcgtactgacgtcgcgaaatcattggttggtattttcttaaatgaccaattagtaaaa
agcaaagcaaagcaagccgtcaaaaacagcgagccagttaaaaatgccgcggtactcggc
gcagggatcatgggcggtggtatagcttatcaatcggcatcaaaaggcgtgcctgtctta
atgaaagacattgcacaagcgtcattagatttagggatgaacgaagcctcgaaactgctt
aataagcaattagagcgcgggcgattatctggactaaaaatggcacaagtactttcatct
atcacaccatcactcaattatggtggcatagagacaaaagacgttatcgttgaagccgtc
gtcgaaaacccaaccatcaaagcagcggtattagctgaagtagaaaatgaagttaatgaa
cacgccatcttagcgtcgaatacctcaactattccaatttcactgctcgctaaatcatta
aaacgtcctgaaaacttctgtggtatgcatttctttaaccctgttcatagaatgccatta
gtggaagttattcgtggcgagaaaacctcacaacaaaccattgatcgcgtagtggcttat
gcttctcaaatgggcaaaacacccatcgttgtgaatgattgtccagggttctttgtgaac
cgtgttctttttccttattttgctggctttagtttattactgcgtgatggcgggaattac
caacaaatcgataaagtgatggaaaaagaatttggctggccaatgggccctgcttatttg
ctagatgtcgtggggattgataccgcccatcatgcacaagcggtgatggcgcaaggtttc
cctgaacgcatggcgaaaaatggccgagatgttatcgatgcgatgtttgaagatgatcgc
tatggccaaaaaaatggaattggcttctatgcttatgcccttgataaaaaaggcaagccg
aagaaaaacattgatgaaaaaaccaatgcaattatcgcaacaataaccgattcaactcaa
ccttacacctctgagcaaattagcgctcgtatgatgatcccaatgattaacgaagtcatt
cgttgtttagatgagggtattatcgcttctccagcagaggctgacatggccttagtgtat
gggttaggttttcctccatttaaaggcggcgtattccgctacctggattctatcggtcta
gacacgtatttagacatggccaaagagtttgagcaattaagtccggtttaccaagtgcct
gacagcatcaaacaaaaagcagcggctggagagtgttattacccagccccgaaatcatct
gtttcatcaccatcggtttaa
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