Aliivibrio salmonicida: VSAL_II0077
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Entry
VSAL_II0077 CDS
T00782
Name
(GenBank) HTH-type transcriptional regulator, AraC-family
KO
K13652
AraC family transcriptional regulator
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsa03000
]
VSAL_II0077
Transcription factors [BR:
vsa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VSAL_II0077
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AraC
HTH_18
GyrI-like
Cass2
Motif
Other DBs
NCBI-ProteinID:
CAQ80831
UniProt:
B6EQ63
LinkDB
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Position
2:complement(102347..103216)
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AA seq
289 aa
AA seq
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MSRQHISRINDVLFYIHQDISQELAVKELADVAAYSEQHFHRIFKQVVGESIHQYIRRTR
MEYAANQLMFDTTSTVLDIANTCGFSSLSSFSRAFKVTFDMSPGEWRKHDLQISDKPYLK
DPEIAAGYLAVADRDLPPPKIIEVPELLAAYVRHDGYNRSIRNAWLILKAWANSENRDFS
TQFGLHHSNPAWVDLNKCRYVACIAIDKPLKYRGVVNQMVIPGGLHAVFRLHGVYGQLLP
QISTVLEKWLPASGFKLRSTPAFVRYHQNHFLNENEQFELDFHLPISFY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacaacacatatccagaattaatgatgtcttgttttatattcatcaagatatc
agccaagaacttgccgtaaaagagcttgcggatgtggctgcgtattcagaacagcatttt
catcgcatctttaaacaagtggttggggagtctattcatcagtatattcgtcgaacacgc
atggaatatgcagcaaatcagctaatgtttgataccacttctaccgtacttgatattgcc
aatacgtgtggtttcagttcactgtcttcattcagtcgtgcatttaaagtcacgtttgat
atgtctccgggagaatggcgaaaacacgatttacagatatcagataagccgtatttaaaa
gacccagaaattgcagcagggtacttggcggttgctgatcgagatttaccaccgcctaaa
attattgaagtccccgagttattagccgcctatgttcgacatgacggttataaccgctca
atcagaaacgcgtggttaatacttaaagcgtgggcgaattcagagaaccgagacttctcg
acacaatttggtttgcatcattcaaaccctgcgtgggtcgatttaaataagtgtcgttat
gttgcttgtattgcgatagataaaccgctgaaataccgaggtgttgtaaaccaaatggtg
atccccggtggtttgcatgcggtgtttcgtttgcatggcgtatatgggcaattattgcca
cagatcagcacggtattagagaagtggttgccagcgtcaggctttaaactgagatcgaca
ccggcgtttgttcgttatcatcaaaatcattttcttaatgaaaacgaacaatttgaattg
gattttcatctgcctattagcttttattga
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