Aliivibrio salmonicida: VSAL_II0232
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Entry
VSAL_II0232 CDS
T00782
Name
(GenBank) putative alpha amylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00500
Starch and sucrose metabolism
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VSAL_II0232
Enzymes [BR:
vsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VSAL_II0232
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Isoamylase_C
ISOA1-3_C
GlgX_C
Bacteriocin_II
Motif
Other DBs
NCBI-ProteinID:
CAQ80986
UniProt:
B6EQL1
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All DBs
Position
2:complement(255229..257208)
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AA seq
659 aa
AA seq
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MLFIQRYIVITNQAFPYPLGANLKAHGCNFSVHYASDYPLTLVIFNNDGSHQEYPFTEEY
GAIKYTFIEGVTAGCIYAFKIIKDKEELLLLDPYAKALANTPHYQTPYTSEQSWTLAQSV
VINNEFDWQQTSRPMIPHSETILLETHVKGFTLLNTKVKEEVRGTYLGLADPANIAHLKQ
QGITSIQLLPVAACMHEPHLLDMKMVNYWGYNPLSFMAPDPRYAKNDAVIELKTAVRELH
KNNIEVILDVVYNHTAEGGNGGSIFNLKGLDQDYYLHHHGNYTNYTGCGNTLDITHQASL
NLVMDTLRYWVEQYHIDGFRFDLAATLGREYDQFNPNNAFFKAVAQDPILQRVKMIAEPW
DIGPNGYQVGEFPDGWNECCDKYRDTTKSFWRGEQNHIKSLATRLMGSRDLVSASRWPHK
LPVNYVSYHDGFTLQDLVSYKDRHNHANGENNRDGHGDNRSDNYGIEGTTSNPRIIALRE
KQKRNMMTTLLFSFGIPHLLAADACSHTQQGNNNAYCQDSTISWVNWSLNRNAKEFKAWL
AEMIHARQTHMAPIINAFSGSRRNGQKVEWYAPDGHVMNHSDWHGAKSLCLHLNVDNGNK
ELLIIINQANTATQFILPEATEQRRWLLICDTQYNKLTSKQTLFDYSLSPLSIAIFATQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtttatccagaggtacattgtgattaccaaccaagctttcccttaccctttaggt
gcaaacctaaaagcacacggatgtaatttttcagttcactatgcttctgattatccatta
acattagtgattttcaataatgatggtagccatcaagaatacccatttactgaagaatac
ggtgctataaaatatacctttatcgaaggtgttactgctggctgcatttatgcttttaaa
atcataaaagataaagaagaattattacttcttgatccttatgcaaaagcattagctaat
acacctcattatcaaacaccctatacctcagagcaaagttggacactggcacaatccgtc
gttattaataatgaatttgattggcagcaaacctcaagaccaatgatcccccactctgaa
actatcttactagaaacccatgtaaaagggtttaccctacttaacactaaggtaaaagaa
gaagttcggggaacttaccttggtttagcggatcctgctaatattgcacatttaaaacag
caagggattacttcaatccagctacttcctgttgctgcttgtatgcacgaaccacattta
cttgatatgaaaatggtcaattattgggggtacaatccactctcattcatggctccagat
ccaaggtacgcaaaaaacgatgccgttatagaattaaaaactgccgttagagagcttcat
aaaaacaacatcgaagtcattttagatgttgtttataaccatacggcagagggaggtaat
ggcggctcaatatttaatttaaaaggattagatcaggactattatctgcaccaccacggt
aactacactaactatacaggttgtgggaatacactcgacattacgcatcaagcaagctta
aatttagtcatggacactttacgctactgggtagaacaatatcatattgatggttttaga
tttgatttagccgctacattaggccgagaatatgaccaatttaaccccaacaatgctttc
ttcaaagcagtcgctcaagatcctattcttcaaagagtgaagatgattgcagaaccttgg
gacattggccctaacggttaccaagtaggggagttccctgatggttggaacgaatgttgt
gataagtatcgcgacacgacaaaaagcttttggcgcggtgaacaaaatcacatcaaatcc
ttagcgacacgacttatgggatctcgagatctggttagtgcttcacgatggcctcacaaa
ttacccgtaaattacgtcagttatcatgatggatttacactgcaagatttggtcagttat
aaagatcgtcataatcatgcgaatggcgaaaataatcgagatggacatggcgataatcgc
tcagataattatggtattgaagggacgaccagtaatccaaggattattgctctacgtgaa
aaacaaaaacggaatatgatgacgacccttctgttcagttttggcattccacacttactc
gctgctgatgcttgctcacatacacagcaagggaataataacgcgtattgccaagacagt
actattagctgggttaactggtcactcaatcgaaatgcaaaagaattcaaagcatggttg
gctgagatgattcacgctcgtcaaacgcatatggctccgataataaatgcattcagtggt
tcgagaagaaatggacagaaagttgaatggtacgcgcctgatgggcatgtgatgaaccac
agtgattggcatggagctaaatcattatgcttgcatctcaatgttgataatgggaataaa
gaattattgatcattattaatcaggcaaatacagcgactcaatttatacttcctgaagcc
acagaacagcgtcgttggttgttaatttgtgatactcaatacaataaattgacgtcaaaa
caaaccctatttgactatagtttgtcacctctttctattgctatcttcgcgacacaataa
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