Aliivibrio salmonicida: VSAL_II0398
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Entry
VSAL_II0398 CDS
T00782
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00630
Glyoxylate and dicarboxylate metabolism
vsa00680
Methane metabolism
vsa01100
Metabolic pathways
vsa01120
Microbial metabolism in diverse environments
vsa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VSAL_II0398
09102 Energy metabolism
00680 Methane metabolism
VSAL_II0398
Enzymes [BR:
vsa01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VSAL_II0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4
Fer4_9
Fer4_8
DAO
Fer4_6
Fer4_2
HI0933_like
Fer4_10
NAD_binding_7
FAD_oxidored
FAD_binding_2
Fer4_15
MurD-like_N
Thi4
Fer4_21
NADH-G_4Fe-4S_3
MVP_shoulder
Fer4_16
Fer4_3
Fer4_4
Lys_Orn_oxgnase
Amino_oxidase
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAQ81152
UniProt:
B6ER22
LinkDB
All DBs
Position
2:445302..449459
Genome browser
AA seq
1385 aa
AA seq
DB search
MMKITIDKQTFTIDEEITLLAAAKECNIEIPSLCGNNINGEKLPCDLCVVEIEGQGVQRA
CETQVVDGMQVITSSEVLAKRRQSALNKILSDHYADCEAPCQTACPAGVDIQSYLYYISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCETECRRGLVDEPLAIRQLKRHAADADLHAQES
YVPPKKADKGKSIAVIGSGPGGLTCGYYLTNEGYNVTVFDSMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMEIKTSVKLGEDFLLSQLSDDYDAVCLAVGASKAVEMQYEGSELGG
CYLGVDYLKDYVMESKLITGKKVAVIGGGNTAIDCARTAVRDGADTTLIYRRTRADMPAE
DYEVVEAEHEGVKFHFLTNPVENIADSKGRVTQVRLEKMALGEPDASGRRSPKATGEFFI
EDFDTVISAVSQKPDLSFLENDNIDLPLTRWNTADSNSLTMHSGVKNIFSIGDFRRGPAT
AIEAVADGRIAAEAIDRFFKGDMEKIPTKLFNSQKEKKTKQVDPTYFEHIQKAMRVIMPE
LTAEQREQSFEEVETGFDNADAIREAERCLECACQANTDCGLRDYATEYKADETDLSNES
KQKFAIDTSSEFIVFDANRCISCGQCVEACNEKGVHGVLSFMKNEDGTNASRPECRAGFE
HGYDMGNSNCVQCGACIQACPVGALVDARDKSQGRIELLKPVDTICTYCGVGCKLTMLVD
ESKNKIKYIQGAKGSPVNEGMLCVKGRFGFDFVGSDQRLTTPLIRKHGELVPASWEEAIT
LVADKFSAIKTQYGGNALAGFSSAKTTNEDNYAFQKLVRCEFETNNLDHCARLCHSTTVT
GLEASIGSGAMTNDIPSIKYSDLIFIIGSDTTSAHPIIASHIKQAIRHHGARLVVADPKQ
VDISDHAELYVAQRPGTDVMLLNGIMQQIIKNNWHDQAYITERVEGFEELKAEVMSETYS
PEKIELITGVKAHDVIEMARYIGTAERTAIYYSMGITQHTTGHDNVRSIANLQMLCGNIG
IEGGGINPLRGQSNVQGACDMGALPTDFPGYQKVENPAVYEKFVKAWNKPNLPDKKGLTL
TEIIDAACHKQVKGLFIMGENPVLSDPDQAHVIHGLETLDFLVVQDIFMTETAAYADVIL
PSCSFAEKAGHFTNTERRVQRISPAVNPPGEAKEDWWIIQEIAKAMGGDWSYQSVEEITE
EITQVTPQYQGMHWDAIGKNGLQWPCNDANPEGTRIMHSDQFIRGKGQMAAVPFRYAAEL
PDEEYPLVLTTGRLLEQYHTGTMTRKTKGLNNLAGPRAMISVADAERLGISNSEMVRVST
RRGTIEAPAFVTKRMQEGVVFVPFHFVEAAANKLTTTALDPHAKIPEFKVAAVKVEKIVV
PEMCE
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaataactatagataaacaaacattcactatcgatgaagagataacactgtta
gctgctgcaaaggaatgcaatattgaaatcccttcactgtgcggaaacaacatcaatggt
gaaaaattgccatgtgatttgtgtgtagtagaaattgaagggcaaggagttcagcgtgct
tgtgaaactcaagtcgttgatggaatgcaagtgatcacttcgtctgaagtattagcaaaa
cgtcgtcaaagtgcattaaataaaatactttctgatcattacgcagattgcgaagcaccg
tgccaaactgcgtgtcctgctggcgtggatatacagtcatatctgtattatatttcacag
aatgatcatcaaaaagccattgaagtcattaaacgaacattaccaatgccattatcgatt
ggtcgtgtgtgtcctgctttctgtgaaacagagtgtcgtcgtggtttagttgatgaacca
ttggctatccgtcaattaaaacgtcacgcggctgatgccgatttacacgctcaagaatca
tacgtaccaccaaaaaaagcagacaagggtaaatcgattgctgttattggtagtgggccg
ggtggattaacctgtggttattacctaaccaatgagggttacaacgtcacggtgtttgat
tcgatgcctaaagcaggtggttggttacgctatggtatccctgagtaccgtttaccaaaa
tcgattttagacaaagaaattgagttgatgtgccgcaacggcatggagatcaaaacctcg
gttaaattaggtgaagatttcttattatcacagttaagcgatgattatgatgcggtgtgt
ttggctgttggtgcgtctaaagcggtagaaatgcagtatgaaggcagtgagcttggtggt
tgttatttaggtgtcgattacctaaaagattacgtaatggaatccaaattgattacgggt
aaaaaagtggccgtgattggtggtggtaataccgcgattgattgtgctcgtactgccgtg
cgtgatggtgctgataccacgcttatttatcgtcgtactcgtgcagacatgccagccgaa
gactatgaagtggttgaggctgaacatgaaggcgttaaattccatttcttaaccaatcct
gttgagaacattgcagattcaaaaggtcgtgttacccaagttcgcttagagaaaatggca
ttgggcgaacctgatgcatcaggccgacgaagccctaaagcgacaggtgaattcttcatt
gaagattttgatactgtaatttcagccgtatctcaaaaaccagatttaagctttttagaa
aacgataatattgatttaccgttaacacgttggaacacggctgactctaatagcttaacc
atgcacagtggtgtgaaaaacatctttagcattggtgattttcgtcgtggccctgcaaca
gcgattgaagccgttgctgatggtcgtattgccgcagaagcgattgatcgtttctttaaa
ggcgatatggaaaagattccgactaagttgtttaattctcaaaaagagaagaagaccaag
caggttgatcctacatattttgagcacatccaaaaagcgatgcgcgttatcatgcctgaa
ttaacggcagagcagcgtgagcaaagttttgaagaagtcgaaacaggctttgataatgcg
gatgcgattcgtgaagcagagcgttgcttagagtgtgcgtgtcaggcgaatactgattgt
ggcttgcgtgattacgcgacggaatacaaagccgatgaaaccgatttaagtaacgaaagt
aagcagaaatttgcgattgatactagctctgagttcattgtgtttgatgccaaccgttgt
atcagctgtggtcaatgcgtagaagcgtgtaacgaaaaaggcgtacatggtgtattgagt
ttcatgaaaaatgaagacggtaccaatgcctctcgccctgaatgtcgtgctggtttcgag
catggttatgacatgggtaactccaattgtgtgcaatgtggtgcgtgtattcaagcgtgt
cctgttggtgcattggttgatgcacgtgataaatcacaaggtcgaattgagttattaaaa
ccggtcgataccatttgtacgtattgtggtgtcggctgtaagttgacaatgttagtggat
gaatcgaaaaacaaaattaagtacatacaaggtgcgaaaggctctccagttaatgaaggc
atgttatgtgtgaaaggacgttttggttttgatttcgttggtagtgatcaacgtttaaca
acaccattaattcgtaaacatggtgaattagtaccagcaagttgggaagaggcaataacg
cttgttgctgacaagtttagtgcaattaaaacgcaatatggcggaaatgcattagcggga
ttctcttctgcaaaaaccaccaatgaagataactacgccttccaaaaattggttcgttgt
gagtttgaaaccaataacctcgatcattgtgcgcgtctttgtcactcaacgacagtgact
ggccttgaagcctcgattggcagtggggcaatgaccaatgatattccaagtattaagtat
tcagatcttatctttattattgggtcagacactacatctgctcacccgatcattgcttcg
catatcaagcaagctattcgtcatcacggtgcgcgtttggttgtggcggatcctaagcaa
gtggatatctcggatcatgctgaactgtatgtagcgcagcgtccggggacggatgtgatg
ttacttaacgggatcatgcagcagattattaagaataactggcatgatcaagcgtacata
acagaacgggttgaaggctttgaagagctgaaagcagaagtcatgtcagagacgtattcg
cctgagaaaattgaattaattacgggcgtgaaagcgcacgatgtgattgaaatggcgcgt
tatatcggtaccgccgagcgtaccgccatttactattcaatgggtattacgcagcacacg
acagggcatgataatgttcgctctattgctaacttgcaaatgctgtgtggcaacattggt
attgaaggtggtggtattaacccgcttcgaggccaatcaaacgtgcaaggtgcatgtgat
atgggcgcgttgccaacggattttcctggttatcaaaaagtggaaaatccagcggtatac
gagaagtttgttaaagcatggaacaagccaaacctaccagataagaaaggcttaacgtta
acagaaatcattgatgcagcatgccataagcaagtgaaaggtttgttcattatgggtgaa
aatccagtattgagtgatcctgaccaagcgcacgttattcacggtttagagacgttagat
ttcttagtggtacaagatatcttcatgacagaaaccgccgcatacgcagacgtgatcttg
ccttcgtgttcgtttgcagaaaaagccggtcactttaccaatacagagcgtcgtgttcag
cgtatttctccggcagttaatcctccgggtgaagcgaaagaagactggtggatcattcaa
gaaattgcgaaagcgatgggcggagattggagctatcaatcggttgaggagatcaccgaa
gagatcactcaggttacgccgcagtatcaaggcatgcattgggatgctattggtaaaaat
ggacttcaatggccatgtaatgatgcgaatccagaagggactcgtattatgcatagcgat
caattcattcgtggaaaaggtcagatggccgctgtgccattccgatacgccgcagaactg
cctgatgaagagtatccattagtccttacaacgggtcgcttattagagcaatatcatacc
ggcactatgactcgtaaaaccaaagggttgaacaaccttgcagggccgcgagctatgatc
agtgtggcagatgctgagcgtcttggtatctcaaacagtgaaatggttagagtctcgact
cgtcgtggcaccattgaggctcctgcatttgtgactaagcgtatgcaagaaggggtggtg
tttgttccgttccactttgttgaagcggctgcgaataaattaaccacaacagcgttagat
cctcatgcgaagatccctgagtttaaagtcgcggcagtgaaggttgagaaaatcgtagta
ccagaaatgtgtgaataa
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