KEGG   Aliivibrio salmonicida: VSAL_II0398
Entry
VSAL_II0398       CDS       T00782                                 
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
vsa  Aliivibrio salmonicida
Pathway
vsa00630  Glyoxylate and dicarboxylate metabolism
vsa00680  Methane metabolism
vsa01100  Metabolic pathways
vsa01120  Microbial metabolism in diverse environments
vsa01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:vsa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VSAL_II0398
  09102 Energy metabolism
   00680 Methane metabolism
    VSAL_II0398
Enzymes [BR:vsa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     VSAL_II0398
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Pyr_redox_2 Fer4_20 Molybdop_Fe4S4 Pyr_redox Fer2_4 Pyr_redox_3 NAD_binding_8 Fer4_7 Fer4 Fer4_9 Fer4_8 DAO Fer4_6 Fer4_2 HI0933_like Fer4_10 NAD_binding_7 FAD_oxidored FAD_binding_2 Fer4_15 MurD-like_N Thi4 Fer4_21 NADH-G_4Fe-4S_3 MVP_shoulder Fer4_16 Fer4_3 Fer4_4 Lys_Orn_oxgnase Amino_oxidase FAD_binding_3
Other DBs
NCBI-ProteinID: CAQ81152
UniProt: B6ER22
LinkDB
Position
2:445302..449459
AA seq 1385 aa
MMKITIDKQTFTIDEEITLLAAAKECNIEIPSLCGNNINGEKLPCDLCVVEIEGQGVQRA
CETQVVDGMQVITSSEVLAKRRQSALNKILSDHYADCEAPCQTACPAGVDIQSYLYYISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCETECRRGLVDEPLAIRQLKRHAADADLHAQES
YVPPKKADKGKSIAVIGSGPGGLTCGYYLTNEGYNVTVFDSMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMEIKTSVKLGEDFLLSQLSDDYDAVCLAVGASKAVEMQYEGSELGG
CYLGVDYLKDYVMESKLITGKKVAVIGGGNTAIDCARTAVRDGADTTLIYRRTRADMPAE
DYEVVEAEHEGVKFHFLTNPVENIADSKGRVTQVRLEKMALGEPDASGRRSPKATGEFFI
EDFDTVISAVSQKPDLSFLENDNIDLPLTRWNTADSNSLTMHSGVKNIFSIGDFRRGPAT
AIEAVADGRIAAEAIDRFFKGDMEKIPTKLFNSQKEKKTKQVDPTYFEHIQKAMRVIMPE
LTAEQREQSFEEVETGFDNADAIREAERCLECACQANTDCGLRDYATEYKADETDLSNES
KQKFAIDTSSEFIVFDANRCISCGQCVEACNEKGVHGVLSFMKNEDGTNASRPECRAGFE
HGYDMGNSNCVQCGACIQACPVGALVDARDKSQGRIELLKPVDTICTYCGVGCKLTMLVD
ESKNKIKYIQGAKGSPVNEGMLCVKGRFGFDFVGSDQRLTTPLIRKHGELVPASWEEAIT
LVADKFSAIKTQYGGNALAGFSSAKTTNEDNYAFQKLVRCEFETNNLDHCARLCHSTTVT
GLEASIGSGAMTNDIPSIKYSDLIFIIGSDTTSAHPIIASHIKQAIRHHGARLVVADPKQ
VDISDHAELYVAQRPGTDVMLLNGIMQQIIKNNWHDQAYITERVEGFEELKAEVMSETYS
PEKIELITGVKAHDVIEMARYIGTAERTAIYYSMGITQHTTGHDNVRSIANLQMLCGNIG
IEGGGINPLRGQSNVQGACDMGALPTDFPGYQKVENPAVYEKFVKAWNKPNLPDKKGLTL
TEIIDAACHKQVKGLFIMGENPVLSDPDQAHVIHGLETLDFLVVQDIFMTETAAYADVIL
PSCSFAEKAGHFTNTERRVQRISPAVNPPGEAKEDWWIIQEIAKAMGGDWSYQSVEEITE
EITQVTPQYQGMHWDAIGKNGLQWPCNDANPEGTRIMHSDQFIRGKGQMAAVPFRYAAEL
PDEEYPLVLTTGRLLEQYHTGTMTRKTKGLNNLAGPRAMISVADAERLGISNSEMVRVST
RRGTIEAPAFVTKRMQEGVVFVPFHFVEAAANKLTTTALDPHAKIPEFKVAAVKVEKIVV
PEMCE
NT seq 4158 nt   +upstreamnt  +downstreamnt
atgatgaaaataactatagataaacaaacattcactatcgatgaagagataacactgtta
gctgctgcaaaggaatgcaatattgaaatcccttcactgtgcggaaacaacatcaatggt
gaaaaattgccatgtgatttgtgtgtagtagaaattgaagggcaaggagttcagcgtgct
tgtgaaactcaagtcgttgatggaatgcaagtgatcacttcgtctgaagtattagcaaaa
cgtcgtcaaagtgcattaaataaaatactttctgatcattacgcagattgcgaagcaccg
tgccaaactgcgtgtcctgctggcgtggatatacagtcatatctgtattatatttcacag
aatgatcatcaaaaagccattgaagtcattaaacgaacattaccaatgccattatcgatt
ggtcgtgtgtgtcctgctttctgtgaaacagagtgtcgtcgtggtttagttgatgaacca
ttggctatccgtcaattaaaacgtcacgcggctgatgccgatttacacgctcaagaatca
tacgtaccaccaaaaaaagcagacaagggtaaatcgattgctgttattggtagtgggccg
ggtggattaacctgtggttattacctaaccaatgagggttacaacgtcacggtgtttgat
tcgatgcctaaagcaggtggttggttacgctatggtatccctgagtaccgtttaccaaaa
tcgattttagacaaagaaattgagttgatgtgccgcaacggcatggagatcaaaacctcg
gttaaattaggtgaagatttcttattatcacagttaagcgatgattatgatgcggtgtgt
ttggctgttggtgcgtctaaagcggtagaaatgcagtatgaaggcagtgagcttggtggt
tgttatttaggtgtcgattacctaaaagattacgtaatggaatccaaattgattacgggt
aaaaaagtggccgtgattggtggtggtaataccgcgattgattgtgctcgtactgccgtg
cgtgatggtgctgataccacgcttatttatcgtcgtactcgtgcagacatgccagccgaa
gactatgaagtggttgaggctgaacatgaaggcgttaaattccatttcttaaccaatcct
gttgagaacattgcagattcaaaaggtcgtgttacccaagttcgcttagagaaaatggca
ttgggcgaacctgatgcatcaggccgacgaagccctaaagcgacaggtgaattcttcatt
gaagattttgatactgtaatttcagccgtatctcaaaaaccagatttaagctttttagaa
aacgataatattgatttaccgttaacacgttggaacacggctgactctaatagcttaacc
atgcacagtggtgtgaaaaacatctttagcattggtgattttcgtcgtggccctgcaaca
gcgattgaagccgttgctgatggtcgtattgccgcagaagcgattgatcgtttctttaaa
ggcgatatggaaaagattccgactaagttgtttaattctcaaaaagagaagaagaccaag
caggttgatcctacatattttgagcacatccaaaaagcgatgcgcgttatcatgcctgaa
ttaacggcagagcagcgtgagcaaagttttgaagaagtcgaaacaggctttgataatgcg
gatgcgattcgtgaagcagagcgttgcttagagtgtgcgtgtcaggcgaatactgattgt
ggcttgcgtgattacgcgacggaatacaaagccgatgaaaccgatttaagtaacgaaagt
aagcagaaatttgcgattgatactagctctgagttcattgtgtttgatgccaaccgttgt
atcagctgtggtcaatgcgtagaagcgtgtaacgaaaaaggcgtacatggtgtattgagt
ttcatgaaaaatgaagacggtaccaatgcctctcgccctgaatgtcgtgctggtttcgag
catggttatgacatgggtaactccaattgtgtgcaatgtggtgcgtgtattcaagcgtgt
cctgttggtgcattggttgatgcacgtgataaatcacaaggtcgaattgagttattaaaa
ccggtcgataccatttgtacgtattgtggtgtcggctgtaagttgacaatgttagtggat
gaatcgaaaaacaaaattaagtacatacaaggtgcgaaaggctctccagttaatgaaggc
atgttatgtgtgaaaggacgttttggttttgatttcgttggtagtgatcaacgtttaaca
acaccattaattcgtaaacatggtgaattagtaccagcaagttgggaagaggcaataacg
cttgttgctgacaagtttagtgcaattaaaacgcaatatggcggaaatgcattagcggga
ttctcttctgcaaaaaccaccaatgaagataactacgccttccaaaaattggttcgttgt
gagtttgaaaccaataacctcgatcattgtgcgcgtctttgtcactcaacgacagtgact
ggccttgaagcctcgattggcagtggggcaatgaccaatgatattccaagtattaagtat
tcagatcttatctttattattgggtcagacactacatctgctcacccgatcattgcttcg
catatcaagcaagctattcgtcatcacggtgcgcgtttggttgtggcggatcctaagcaa
gtggatatctcggatcatgctgaactgtatgtagcgcagcgtccggggacggatgtgatg
ttacttaacgggatcatgcagcagattattaagaataactggcatgatcaagcgtacata
acagaacgggttgaaggctttgaagagctgaaagcagaagtcatgtcagagacgtattcg
cctgagaaaattgaattaattacgggcgtgaaagcgcacgatgtgattgaaatggcgcgt
tatatcggtaccgccgagcgtaccgccatttactattcaatgggtattacgcagcacacg
acagggcatgataatgttcgctctattgctaacttgcaaatgctgtgtggcaacattggt
attgaaggtggtggtattaacccgcttcgaggccaatcaaacgtgcaaggtgcatgtgat
atgggcgcgttgccaacggattttcctggttatcaaaaagtggaaaatccagcggtatac
gagaagtttgttaaagcatggaacaagccaaacctaccagataagaaaggcttaacgtta
acagaaatcattgatgcagcatgccataagcaagtgaaaggtttgttcattatgggtgaa
aatccagtattgagtgatcctgaccaagcgcacgttattcacggtttagagacgttagat
ttcttagtggtacaagatatcttcatgacagaaaccgccgcatacgcagacgtgatcttg
ccttcgtgttcgtttgcagaaaaagccggtcactttaccaatacagagcgtcgtgttcag
cgtatttctccggcagttaatcctccgggtgaagcgaaagaagactggtggatcattcaa
gaaattgcgaaagcgatgggcggagattggagctatcaatcggttgaggagatcaccgaa
gagatcactcaggttacgccgcagtatcaaggcatgcattgggatgctattggtaaaaat
ggacttcaatggccatgtaatgatgcgaatccagaagggactcgtattatgcatagcgat
caattcattcgtggaaaaggtcagatggccgctgtgccattccgatacgccgcagaactg
cctgatgaagagtatccattagtccttacaacgggtcgcttattagagcaatatcatacc
ggcactatgactcgtaaaaccaaagggttgaacaaccttgcagggccgcgagctatgatc
agtgtggcagatgctgagcgtcttggtatctcaaacagtgaaatggttagagtctcgact
cgtcgtggcaccattgaggctcctgcatttgtgactaagcgtatgcaagaaggggtggtg
tttgttccgttccactttgttgaagcggctgcgaataaattaaccacaacagcgttagat
cctcatgcgaagatccctgagtttaaagtcgcggcagtgaaggttgagaaaatcgtagta
ccagaaatgtgtgaataa

DBGET integrated database retrieval system