Aliivibrio salmonicida: VSAL_II0671
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Entry
VSAL_II0671 CDS
T00782
Symbol
vcaM
Name
(GenBank) ABC-type multidrug efflux pump, ATP-binding component
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSAL_II0671 (vcaM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsa02000
]
VSAL_II0671 (vcaM)
Transporters [BR:
vsa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VSAL_II0671 (vcaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_29
AAA_21
DUF4870
AAA_24
AAA_16
Zeta_toxin
Septin
Motif
Other DBs
NCBI-ProteinID:
CAQ81425
UniProt:
B6ERU1
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All DBs
Position
2:734170..735993
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AA seq
607 aa
AA seq
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MFKFFERITTAFPEQEPEQPPKGLYAFCRHYTKGFGVPLIGMSVLSAIIAMVEVSLFGFM
GQLVDWLSTHNRDTFLAQEGQTLMWLGILVVIGMPILILMHSLITHQTLLGNYPMAIRWQ
AHRYLLKQSVSFYSDDFAGRIATKVMQTSLSVRETVMKLLDVLIYISVYFTSMIVMVGKA
DWRLMLPMLIWLAAYIAIQFYFVPRMKAVSEKQADARSTMTGRIVDSYTNINTIKLFSHS
KRETEYAKEGMDDFLVTVHKQMRLATGINISVEIINYLLVFSITAVSIMLWIDNELSVGA
IAIAISLALRINGMSHWIMWEISSLFENLGTVTDGMNTLSKPITINDKPDATELSVKHGN
IQFKNVNFHYGENKGVINNLNLDIKPGEKIGLVGRSGAGKSTLVNLLLRFHDIESGSISI
DGHDIRDVSQDSLRSQIGMVSQDTSLLHRSIRDNIKYGRPDASDEELFAATRQAQAHEFI
ETLTDSYGSTGYDAQVGERGVKLSGGQRQRVAISRVLLKDAPLLILDEATSALDSEVESA
IQDSLDELMEGKTVIAIAHRLSTIAAMDRLIVMDQGQVVEQGTHKELVEFGGIYAQLWTH
QTGGFIK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattctttgagcggatcactaccgctttccctgaacaagaaccagaacaacca
ccaaaagggttgtatgctttttgtcgccattacaccaaagggttcggagttcctttaatc
ggcatgtcagtacttagtgctatcatcgccatggttgaagtgtctctttttgggtttatg
gggcaattagttgattggctatccactcataacagagacacctttttagcacaggaagga
caaaccttaatgtggttaggtattcttgttgttattggaatgccaattttaatcttgatg
cattcattaattacacaccaaacgttattgggtaattatccaatggctattcgctggcaa
gcgcatcgataccttttaaaacaaagtgtttctttttattcagatgattttgctggtcgt
attgcaacaaaagtaatgcaaacctcattatcggtccgtgaaaccgtaatgaagctactt
gatgtgcttatctatatttctgtttattttacctccatgattgtgatggtaggaaaggca
gattggcgtctcatgttacctatgcttatttggcttgcggcatacattgcaattcaattt
tacttcgtccctagaatgaaagccgtttcagagaagcaggccgatgctcgttctacaatg
acaggacgcattgtcgacagttacaccaacatcaatacgatcaaattgttcagccacagt
aagcgcgaaactgaatacgcgaaagaaggcatggacgattttttagtgacggttcataaa
caaatgcgtttagctactggcattaatatctctgtagagatcattaactacttattagtc
ttctcaattaccgcggtttctatcatgctgtggattgataatgagttatctgttggggct
attgcgattgcgatcagtttagcgttacgtatcaatggtatgtctcattggatcatgtgg
gaaataagctccctatttgaaaacctaggcacggtgacggatggaatgaataccttatcc
aaaccaattaccatcaatgataaacctgacgctacagagctttctgttaagcatggaaat
attcaatttaagaatgttaacttccattatggcgagaacaaaggagttattaataatcta
aaccttgatatcaaaccgggagaaaaaatagggttggtgggacgttctggtgctggtaaa
tcaacattagtgaacttgttacttcgtttccatgatattgaatcagggtctatatctatt
gatggccatgatattcgcgatgtttctcaagattcactacgtagtcagataggcatggtg
agccaagatacttccctacttcatcgctctattcgtgacaatatcaaatatggtcgtcct
gatgcgtctgatgaagagttgtttgcagcaaccagacaagcacaagctcatgagtttata
gaaaccttaacggattcttatggcagtactggctatgatgcacaagttggtgaaagagga
gtgaaactctctggtggtcaacgccaacgagttgctatatctcgcgtgttgttaaaagat
gcccctctattgattttagatgaggcaacctctgcacttgattctgaagtagaatccgct
attcaagacagcctagatgaattaatggaaggaaaaaccgttattgctattgctcatcgt
ctatcaacgattgccgcaatggatcgcttaattgtcatggaccaaggccaagttgttgag
caaggaacccataaagaactcgttgagttcggcggtatttatgcccaattatggacccat
caaactggtggctttataaaataa
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