Aliivibrio salmonicida: VSAL_II0866
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Entry
VSAL_II0866 CDS
T00782
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase (photoreactivating enzyme)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_II0866 (phrA)
Enzymes [BR:
vsa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VSAL_II0866 (phrA)
DNA repair and recombination proteins [BR:
vsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VSAL_II0866 (phrA)
Prokaryotic type
VSAL_II0866 (phrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAQ81620
UniProt:
B6ESD3
LinkDB
All DBs
Position
2:950133..951572
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AA seq
479 aa
AA seq
DB search
MDYKPTTQCVWFRTDLRIADNPALSAALANQEPTIALYVVSEAQWKKHHKSSIQIDLIKR
RLLELEKELQEINVPLIIVSCPWFKNTSEQLTMLCNDLNITHLFANKEYEADELARDADV
RSQLTNIESHFYNAKCAVTVGKIINKTQKPYKVFTPFKKAWRAYFYQHFPTIEKVIPSVP
LSEQQLSTLTSYLDRKFTSSMNNESKVWPVSNTAILKKMRLFCREKSQDYHDQRDYPAID
GTSQISPYLAIGALSAKQCILRLHLEANNQLSQGQEIWLDELIWREFYTHLLYFFPSLSK
NHAFLDFEKHIQWNNKQDQFEQWCNGETGYPIVDAAMKQLNTTGWMHNRLRMITASFLVK
DLHIDWRWGEQYFMSTLIDGDFASNNGGWQWCASVGCDSSPYFRIFNPTTQSERFDNNGV
FIKYWLPNLAALLGKQLHQPSVKPLLKPDNYVDPIVDHSVQRLKTLELYKQAKIQDVAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggattataaaccaacgacacaatgtgtttggtttagaactgatttaagaattgctgat
aaccctgcgttatcggcagcccttgccaatcaagaaccaaccattgctctttatgtcgtt
agtgaagcgcaatggaaaaaacaccataaatcttctattcaaattgatttaattaaaaga
cgtttacttgagttagaaaaagagctgcaagaaataaacgtcccattaattattgtgtct
tgcccgtggttcaaaaatacctcagagcaacttacaatgctctgcaacgatctcaatatt
actcatctgtttgcgaataaagaatacgaagccgatgaattagcccgagatgccgatgta
agatcacagttaacgaatattgagagccacttctataatgcaaagtgcgccgtcacggtt
ggtaaaataataaataaaacccagaaaccttataaagtattcaccccctttaaaaaagca
tggagagcgtatttttatcagcacttcccaaccatagaaaaagtcattccttcagttcca
ctgtctgaacaacagttaagtacattaacatcttatttagatagaaaatttacctcatcg
atgaataatgaaagcaaagtgtggccagtttcgaatactgcaatacttaaaaaaatgcgt
ctattttgccgagagaaatcgcaagattatcatgatcagcgtgattacccagccatcgat
ggtacgagtcaaatatcgccttatcttgctattggtgcactttcagcaaaacaatgtatt
ttacgtttgcacttagaagccaataatcaactctcacaaggtcaagaaatttggcttgat
gagttaatttggcgagaattttacacccacttactctatttttttcctagcttatcgaag
aaccacgcgttccttgattttgaaaaacacattcagtggaataataaacaagatcagttt
gaacaatggtgtaatggtgaaactggctaccctattgtcgatgccgcgatgaaacaactg
aataccacaggttggatgcataatcgattacgtatgatcacagcgagttttttagtaaaa
gatttacacattgattggcgctggggagaacaatattttatgtctacactcattgatggt
gactttgcatcaaataatggaggttggcaatggtgtgcttcggtaggttgtgacagctca
ccttattttcgtatttttaatcccacaacacaaagtgaacgctttgataataatggcgtt
ttcattaaatactggttacctaacttagccgctctcttaggaaagcagctacatcaaccc
agtgtgaaaccactgttgaaaccagataattatgttgatcccattgttgatcattcagta
caacgacttaaaacactggaactatacaaacaagctaaaatacaggatgttgcaagttaa
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