Aliivibrio salmonicida: VSAL_II1066
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Entry
VSAL_II1066 CDS
T00782
Symbol
speF
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa00330
Arginine and proline metabolism
vsa00480
Glutathione metabolism
vsa01100
Metabolic pathways
vsa01110
Biosynthesis of secondary metabolites
vsa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VSAL_II1066 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VSAL_II1066 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VSAL_II1066 (speF)
Enzymes [BR:
vsa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VSAL_II1066 (speF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
CAQ81820
UniProt:
B6ESX0
LinkDB
All DBs
Position
2:1159759..1161951
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AA seq
730 aa
AA seq
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MKNLSIAISNNLGDYFMPLADMLVETFNRELRPIDTVALTDVSAVILSLDDVSGKVHQQI
EETCYGIPVFVICGDGTRQLCSCDYAKVTSVIDLTQQSISYYCRQINEAAHKYESKVLPP
FFEKITRYVDQGNAAFDCPGHQGGQFFKKHHAGKQFYDFFGENLFRSDLCNADVALGDLL
IHEGHACAAQKHAAKVFNADKTYFVLNGTSASNKVACNAILTPGDLVLFDRNNHKSNHHG
ALFQAGGIPVYLETARNPYGFIGGIDEHCFDESYIRGQIAKTDPERAKEERPFRMAIIQL
GTYDGTIYNARFVMDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVLVT
QSVHKQQAGFSQTSQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAK
IHDGASGRKLWHECVKIGIETRKELLNSCEYITPFIPEIVDGQLWQDYDTELIANEKKFF
LFNPEDTWHKFEGYGKEQYFVDPCKLLLTTAGINEHGDYAEFGIPATLLANFLRENGIVP
EKCDLNSILFLLTPAEDMAKMHQLVAQINRFEQFVKEDAPLQVVLPTVYEANKDRYKGYT
IQQLCLEMHNMYRELNVKELQRCMFREAYFPEMKMLPQQANTQYFRGECEYVELKEATGR
IAAEGALPYPPGVLCVIPGEAWTSQVTQYFLALEEGINQFPGFAPEIQGVYLEEVNGRTT
AFCYVLNESN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaagtattgcgataagtaataatcttggtgattacttcatgcctctcgct
gatatgttggttgaaacgtttaaccgagaattaagaccgattgatactgtcgcattaacg
gatgtgagtgctgttattctttcccttgatgatgtgtcaggtaaggtacatcaacaaatt
gaagaaacgtgttatggcattccagtttttgttatttgtggtgatggtactcgccaactt
tgctcttgtgattatgcaaaagtaaccagtgttattgatttaactcaacaatctatctca
tattattgtcgtcaaattaacgaagctgctcataaatacgaatcaaaagtgttgccacca
ttttttgaaaaaataacccggtatgttgatcaagggaatgcggcgtttgattgtcccgga
caccaaggaggacagtttttcaaaaaacaccatgctggtaaacagttttatgatttcttt
ggcgagaatttatttcgaagtgatttatgtaatgcggatgtggcattaggggatttgtta
atccatgaaggtcatgcgtgtgcagcacaaaaacacgcagcaaaagtgtttaatgcagat
aaaacgtactttgttcttaatgggacatctgcatcaaacaaggttgcttgtaatgcaatt
ttaactccgggagatttggtgctatttgaccgaaataaccataaatcaaatcatcacggt
gcgttatttcaagcgggtgggattcctgtttatttagaaacagctcgaaatccatacgga
tttattggtggcattgatgaacattgttttgatgaaagttatattcgcggtcaaattgca
aaaacagatccagaaagagcaaaagaagaacgtccattcagaatggcgattattcaacta
ggaacctacgacggtacgatttataacgcgcgttttgtaatggataaaattggccactta
tgtgactacattttatttgattctgcatgggtaggctacgagcaatttattccaatgatg
aaagattgctctccattattgttggatttaaaacctgaagatgcaggtgttttggttact
caatcggttcataagcaacaagctggtttttctcaaacctcccaaatccataaaaaagac
cgtcatatcaaaggacaagctcgttactgtaatcataaacgctttaataatgccttcatg
atgcatgcgtcaaccagcccattttatgctttattctcagcattagatgtgaatgccaaa
attcatgatggtgcatctggccgtaagttatggcatgagtgtgtaaaaattggtattgaa
acgcgtaaagaattattgaatagctgtgaatatattacgccatttattcctgaaatagtt
gatggccaattatggcaggactatgacacggaattaattgcaaatgagaaaaaattcttc
ttatttaatcctgaagacacatggcacaaatttgaaggttacggtaaggaacaatacttt
gttgatccatgtaaattgttattaacgacagcggggattaatgaacacggggattatgct
gaatttggtattccagcaacgctactcgctaacttcttacgtgaaaatggcattgttcct
gagaagtgtgatttgaattctattttgttcttgcttacacctgctgaagacatggcaaaa
atgcaccaactggtggcgcaaattaatcgcttcgaacaatttgtgaaagaagatgctcca
ttgcaagtggtgttaccaaccgtgtatgaagcaaataaagatcgttataaaggttataca
attcaacagttatgtcttgaaatgcataatatgtaccgtgagttgaatgtaaaagagctg
caacgttgtatgttccgtgaggcctatttccctgaaatgaaaatgcttcctcaacaagca
aacactcagtatttccgtggagagtgtgaatacgtagaactgaaagaagcaacgggacga
atcgccgctgaaggtgcacttccttatcctccgggtgtgctatgtgtgatccctggagaa
gcgtggaccagccaagttacccaatacttcttagcattagaagaggggattaaccagttc
ccaggattcgctcctgaaattcaaggtgtttatttagaagaagtaaatggccgaactacc
gcattttgttatgtccttaacgaatcaaactaa
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