| Entry |
|
| Symbol |
traI
|
| Name |
(GenBank) protein TraI (DNA helicase I)
|
| Organism |
vsa Aliivibrio salmonicida
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
pVSAL840:20545..26355
|
| AA seq |
1936 aa
MISISPIASAGEATKYYLDDEKHLNGEQSELTTEKENSESDKEKNYYLKDSNNTAWFGKL
ATEKGLDGKPIEGDTLQAVLSGSLLDETIHGKRDKHRAGFDLTFSAPKSVSVLALVGGDT
RLLDGHNNAVKFALSELEKDAAQVKYTEEDTKKQSYANSKSMLFGLVQHKTSREDDPQLH
THALTANMTRDEQGRLRALATSLKQSGGVINGTMERVYNNQLYYGMLYQSHLSKQAESLG
YTIKGAGNGQFEIEGVPQSLMDDFSKRSQQINEKTQDLGFNSQQTRDLAAKNTRKAKTHK
DAVELNSTWQHTVKTDGFDITAFINNAKENPVKAPNENVIKPRAVDALTRTINHLSKTQT
QLSYEKMVSFAMSEFTKGEKLDALDIKLALDERIASKELIGLDKNNSQFTTTALLNNEKK
LINSTKGRPRHMRTQPNDTALSQLNLNKENQNKLAELFLSTKQFNTVNVFGSSEQVAKGL
LHVGSESGKRIHIMTQGGISQEKTERTIKRQSHTPLQWIKNTFRADFVHGVNQYLGDKVT
PFSNKDVFVFEDSGKFSGDQLIDITNKAKHTNSKIIFLNHASARQGMKSHSSMDLLSKGN
TNNINWVNNQPTKAKIKIHDNNLNELVNQYAEKPDKNTIQVLATTNADVKTLNTAIRERL
KQTGEVSRQGVSISTLNPHFLSQEQRTLSTHYKPGMVLRSWSEGAMSQYIVSKPHRKTNT
LDIIDEKGNQLTIDPSKPAHNFSVFKKESLEIASGDKIITSGKHYASQLAAHQAFIVKKA
TPQSITLEDREGQQKTIKTKHLTDAPITHNFASTTQKISDTATHLMVQTKAYSASKELLN
ELSLNRNNIDIFTDDKEKVAAQFEKNEVRPAAIERVMATTQPTEKYLSTLTTNTVTKDVE
QALRLLNTPTSNNIEKAVNFAIHHISEKEAGYTQKELVMQAIRYSLEETGTAISKEDIID
TLKNNQETLSSEFSDGTRWTTKDAIHTEKTILDTLARGKNQTTPFVTHAQATEFLQHESR
LTQGQKESVHMIATTPDRFVAVQGLAGTGKSTMLEKDIELIHSIDKLSNKETTILGLAPT
HAAVNELKNKGVEAQTLQSLLADIQSGKTTANTYQQTLFLLDESSMIGNNDMKHFTALVE
KSDAKAVLLGDKAQLQSLSAGKPFELAMSSNALNRTDMTDIVRQQNDTLLGAVHNMVDKQ
PESSLSKLKQQPNADTGIHKTHHVVSTYEKITPNHRENQEIATEKLAHVVAQDYLSRTEQ
SQEDTLIIAYTNKERDTITEHIRHGLQQSNQLHKENTLMPRLRSIGATKEEMATMLPYKK
GLVVKTGKDTLSTIIHVDNKHNLVTVKEQSTGKERPFFPKNSDHKMTNLFTRSDQPLSTN
DKVMMRMTDKDKGIEANTPYTVSNIENNLITLSNKKQHTITLSTTDLKDAHWDYSYTRTA
NMAQGATYKNVITAIKGRGQLTNIRRAYIDLTRASEHVKLYTDNEGTMIKQWLNNQDDKR
SAIETNTLSTPKESITFNTAPLPKENPHYQDINGNLDMKIMAKKLNSELAMRAESLAIHL
LGTPNKSKSDRDYLTFGIGKSALKVTLTGKHRGHFKDWTTGEKGNGINLIMAVENIGFKD
ALLHADTLLNQTKDNPLTLNPNHEKLTNTTPKFISELEARARQYQQEATPIKGTIAQEYL
RNKGIIIDDHPSIKFHPKVYSSETRSNYPAIISTIENNKGQSNAIEITYLDNKGHTADLN
IEKRVLGTKTKSNVVINEGSNTNISIITTTIEDALLINQHNNKDIDINTVNNKNDIQIMD
KNTLRDNIIIVLNTKGETLNENNITKIMDNFTNHTVTFIDNAELQKQIDTEITKIEHGQL
EIKNEVGNNLDMHKQENAIKQEDEHLLSSQSKFIKEQERKEENELMSKVSNINMDEKSTP
DIDTNPQRLMELDRER |
| NT seq |
5811 nt +upstreamnt +downstreamnt
atgatatccatttccccaatcgcgagcgctggcgaagccactaaatattacctagacgat
gagaagcacctcaatggcgagcaatccgaactcacgacagaaaaagaaaacagcgagtct
gataaggaaaagaattactacttaaaagacagcaacaacaccgcgtggtttggaaagtta
gccaccgaaaaaggcctggatggaaaacccatcgaaggggataccttacaagcggtactt
tcaggctcgttactcgatgaaaccattcatggaaaacgtgacaaacaccgagcagggttt
gatttgaccttttcggcgccaaaatccgtcagcgttctggccttggtcggtggggacact
cgactgcttgatggccacaacaacgccgttaaattcgctttatctgagcttgaaaaagac
gccgctcaagtcaaatacaccgaagaggacacaaaaaaacaatcctacgccaacagcaaa
agcatgttgtttggtttggttcagcacaaaaccagtcgagaagacgatccacaacttcac
actcacgccctgaccgccaacatgactcgtgacgaacaaggtcgattacgcgccttggcc
accagtttaaaacaatctggtggggttattaatggcacaatggagcgcgtatacaataat
caactctactatggcatgctctaccaaagtcatttatccaaacaagcagaaagcctgggc
tacacaatcaaaggagctggcaatggtcagtttgagattgagggggtgcctcaatcactc
atggatgacttttcaaagcgaagccaacaaatcaatgagaaaacccaagacttagggttt
aattctcaacaaacccgagacttagcggccaaaaacacccgaaaagccaaaacacacaaa
gacgccgttgagctcaacagcacctggcaacataccgtaaaaaccgacgggtttgatata
accgccttcattaacaacgcaaaagaaaatccggttaaagcgcccaatgaaaacgttatc
aaaccacgcgccgtggatgcgctgactcgtaccatcaatcatttatcaaaaacacaaacc
caattgagttatgaaaaaatggtgtcttttgccatgagtgaattcaccaaaggagaaaag
ctcgatgcactggacatcaagcttgcgcttgatgagaggatcgcttcaaaagagctgatt
ggattagacaaaaacaacagtcaattcacaaccacagccttattgaataacgagaaaaaa
ctcattaattccaccaaggggcgccctcgccacatgcgcacccaacccaacgacactgca
ctatctcaactcaatttaaacaaagaaaaccagaacaaactcgcggaattatttctttca
accaaacagttcaatactgtcaatgtgtttggttcgagtgagcaagtagcaaaagggctg
ctgcatgtcggctctgaaagcggcaagcgcattcacatcatgacgcagggtggcatctct
caagaaaaaacagagcgcaccataaagcgccaatcccacactccactccaatggataaaa
aacacgttcagagcggattttgttcatggggtaaatcaatacttaggtgacaaagtaacg
ccctttagcaacaaagacgtttttgtctttgaagacagcggtaaattcagtggcgaccaa
ctcatcgacatcaccaacaaagcaaaacacaccaacagtaagataatcttcctcaaccat
gcctccgcacgacaaggcatgaaatctcactcttcaatggaccttttaagcaaaggaaac
accaacaacatcaactgggtaaacaatcaacccaccaaagcgaaaataaagatccacgac
aacaacctcaatgagttagtcaatcaatatgcagaaaaaccagacaaaaacacgatccaa
gtgctggcaacaaccaatgctgacgtgaaaacactcaacaccgccatcagagaaagactc
aaacaaacgggcgaagtgtcacgccaaggcgtgagcatttcgacgttaaacccccacttt
ctaagccaagagcaacgtaccctgtccacccattacaaaccaggcatggtacttcgctca
tggagcgaaggcgcgatgagtcaatacatcgtcagtaaaccccacagaaaaaccaacacg
ctggacatcatcgatgaaaaaggcaatcaactcaccatcgacccatcaaagccagcgcat
aatttttctgtctttaaaaaagaaagcctagagattgccagcggcgataaaatcatcaca
agcggaaaacattacgcctctcaactcgccgcccatcaagcgttcattgtaaaaaaagcc
acacctcagtccatcaccttagaagacagagagggccaacaaaaaaccattaagacaaaa
cacctgacggacgcgcccatcacgcacaactttgccagtaccactcaaaaaataagtgac
acggcaacgcacctcatggtgcagaccaaagcgtatagcgcctctaaagaattactcaat
gagttgagcctcaatcgaaacaacatcgatattttcactgacgacaaagagaaagtcgcg
gcgcagtttgaaaaaaacgaagtcagacccgccgccattgagcgagtcatggccacaaca
cagccgacagaaaaatacctatcgacactgacaaccaacaccgtgaccaaagacgttgaa
caggcattgcgcctgttaaacaccccaacctcaaacaacattgaaaaagcagttaacttt
gccattcatcacatcagtgaaaaagaagccggttacacccaaaaagagctcgtcatgcaa
gcgatacgctacagtctagaagagaccggcaccgccatcagcaaagaggacatcattgat
accttaaaaaacaatcaagaaaccctctctagtgaattcagtgatggcacccgctggaca
accaaagacgccatccataccgagaagaccattctcgataccttagcgcgagggaaaaac
caaaccacgccctttgtcactcacgctcaagccaccgaatttcttcaacatgaaagccga
ctcactcaaggacaaaaagaaagcgtccacatgatagcgacaacccccgatagattcgtg
gcggtacaaggactggcgggaaccggtaaatcaaccatgcttgagaaagacatcgaactc
attcacagcatcgacaaactctcaaacaaagaaacgaccatccttggtctggcgcccact
cacgccgccgtaaacgagctcaaaaacaaaggcgttgaagcgcaaacgcttcaatcctta
ctcgccgacatccagagtggcaaaaccacagcaaacacataccaacaaacgctttttctt
ctcgatgaaagctccatgattggcaacaatgacatgaaacacttcaccgccttagttgag
aaaagtgacgcgaaagcggtgcttcttggggacaaagcgcaattgcaatcactcagcgca
ggcaaaccttttgagcttgccatgagcagcaacgcccttaatcgcaccgacatgacggac
atcgtaagacaacaaaacgacaccctccttggcgcggtgcacaacatggtagacaaacag
ccagaaagcagcctaagcaagctcaagcagcaacccaacgccgacacgggcatccacaaa
actcatcatgtcgtctcaacctacgagaaaatcacccccaaccacagagaaaaccaagaa
atagccacagagaaactggctcacgtcgtcgcacaagattacctttcaagaaccgaacaa
tcgcaagaagacacgctcatcattgcttataccaacaaggagcgggacaccatcactgaa
cacatcagacatggcctccaacaaagtaatcaacttcataaagaaaacacactcatgcca
cgactgcgcagcattggcgccaccaaagaagaaatggccactatgttgccttacaaaaaa
ggactcgttgtaaaaacaggcaaagacaccctatccaccatcattcacgtggataacaaa
cacaacctagtgacagtaaaagagcagagcacaggaaaagaacgcccgttctttcctaaa
aatagcgatcataaaatgacaaacctgttcactcgcagtgaccaacccctctcaaccaac
gataaagtcatgatgagaatgaccgacaaagacaaaggcattgaagccaatacgccgtat
accgtcagtaacattgagaacaatctcattacccttagcaacaaaaaacagcacaccatc
accctatcaaccacggatttaaaagacgcccactgggattattcgtacaccagaaccgca
aacatggcgcaaggcgccacgtacaaaaacgtcatcaccgccatcaaaggccgtgggcaa
ctgaccaacattcgtcgtgcttatatcgatttaactcgcgcatccgagcacgtaaaactc
tacaccgacaacgaaggcaccatgataaaacaatggctcaacaaccaggacgacaaacgc
tctgccattgagaccaatacactctcaaccccaaaagaaagcatcacctttaacaccgcg
ccactgccaaaagaaaacccacattaccaagacatcaatggcaatttggacatgaaaatc
atggccaaaaaactcaatagcgagctcgccatgcgagccgaatcactcgcaattcaccta
cttggtaccccaaacaaaagcaaatcagaccgtgattacctcacttttggcatcggtaaa
tccgcgttaaaagtcacgctcacaggcaagcatcgtggccactttaaagactggacaacc
ggcgaaaaaggcaatggcataaacctcattatggcggttgaaaacatcggttttaaagac
gcgttactgcacgccgatacgctgcttaatcaaaccaaagacaacccgttaaccctcaat
ccaaaccatgaaaaactgaccaataccacgcctaaattcatcagcgagctcgaagcccgc
gcgcgccaataccaacaagaagcaaccccaatcaaaggcacgattgctcaagaatacctg
cgcaataaaggcattattattgacgaccacccaagcattaaatttcacccaaaggtatat
tcatcagaaacacgaagtaattaccctgcgattatctcaaccatcgaaaataacaaaggc
caaagtaacgccattgaaataacgtatttagataacaaaggacataccgccgacttaaat
atagaaaaacgcgtactcggcactaaaacaaaatcaaacgtcgttattaacgaaggctca
aacaccaacatcagcattattaccacgaccattgaagacgccctattaattaatcaacac
aacaataaagacatcgacattaataccgttaataataaaaacgacattcaaataatggat
aaaaacacattacgagacaacatcatcattgtattaaacaccaaaggagaaaccctaaac
gaaaataacatcacaaagataatggacaactttaccaaccataccgtcacctttattgat
aacgcagaattacagaaacaaatcgatactgaaataacaaaaattgaacacggtcagtta
gaaataaaaaatgaagtaggcaacaatcttgatatgcacaaacaagagaatgccattaaa
caagaagatgaacacctattgtcatctcaatccaagttcattaaagagcaagaaagaaaa
gaagagaacgaactcatgagcaaagtcagcaacatcaatatggatgaaaagagcacacca
gacatcgataccaacccccaaagactcatggaattggacagagaaagataa |